Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq774 105 5e-17
seq485 96.9 3e-14
>seq774
Length=5862070
Score = 105 bits (116), Expect = 5e-17
Identities = 360/554 (65%), Gaps = 18/554 (3%)
Strand=Plus/Minus
Query 281777 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 281836
|||||||| || ||||||||||||||||| | | | || || | ||| ||||||||
Sbjct 3851488 GCACCATAAGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAGCTCTTTGCCATTGAAG 3851429
Query 281837 AAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 281895
|| | || |||| ||| | ||| || ||||||| || || ||||| | || ||
Sbjct 3851428 AAGTCCTGCAGCAGTT-TCTGAATCTTTGGGATACGAGTAGACCCACCAACCAGCACGAT 3851370
Query 281896 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 281955
||||| | ||| ||||| || ||||| | |||| | | ||||| || || || ||
Sbjct 3851369 GTCATGGATCTGCGATTTGTCGAGTTTGGCATCCCGCAGGGCCTTTTCCACAGGATCCAG 3851310
Query 281956 ACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAA--GA-GTGAC 282012
| | |||| ||| | | || ||||| || |||||| |||| || |||
Sbjct 3851309 GGTGCCACGGAACAGGTCAGCATTCAGCTCTTCAAAGCGAGCTCTGGTAATGGATGTG-- 3851252
Query 282013 ATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAG 282071
|| || ||||| || || | | |||||||| ||| || | | || || |||||
Sbjct 3851251 --TAGAAGTCAATACCCTCATAGAGAGAATCAATTTCGATACTGGCCTGCGTGCTAGAAG 3851194
Query 282072 ATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGG----CTTTTGCT 282127
| || | ||| || ||||| || ||||| || | || | || | | ||| | ||
Sbjct 3851193 ACAGAGTACGCTTTGCACGCTCGCATGCGGTGCGGAGGCGACGAACTGCTCTCTTGTTCT 3851134
Query 282128 GATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA 282187
|||| ||| | || | || | |||||| || ||| | | || |
Sbjct 3851133 CGCTGAT----GTCTTTCTTGTGCTTGCGCTTGAATTCAGCAATGAAGTGGTTGACCATG 3851078
Query 282188 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 282247
|| || ||||| ||||| || ||||| | ||| | |||| || | | | || | ||
Sbjct 3851077 CGGTTGTCAAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGATTTCACCTCAAAG 3851018
Query 282248 AGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATA 282307
| |||||||||| | || || | |||||| ||| ||||| || | || || |||
Sbjct 3851017 ATGCCATCTTCAATGGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCGAAGATA 3850958
Query 282308 AGTACATTCATTTC 282321
|| |||||| ||||
Sbjct 3850957 AGAACATTCCTTTC 3850944
Score = 104 bits (114), Expect = 2e-16
Identities = 137/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749
|||||| |||||||||||||| | |||| |||| | || || ||||| || ||||
Sbjct 3849856 CAAAAACCGTATTGGTTGGATTCATTGCAACTTGGTTCTTCGCAGCATCGCCGATCAACC 3849797
Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809
|| || ||||| || | ||| || ||| || || || ||||| || ||||| ||||
Sbjct 3849796 TCTCCGTATCTGTGAAGGCAACGTAGCTTGGCGTGGTCCGGTTACCCTGGTCATTGGCAA 3849737
Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869
| ||||| || || |||| ||| ||||||| ||||| | | || || || | |||||
Sbjct 3849736 TGATTTCCACCTTCCCATGTTGGAATACACCAACACAGGAATAGGTGGTACCAAGATCAA 3849677
Query 282870 TACCAATAGC 282879
| || | |||
Sbjct 3849676 TTCCGACAGC 3849667
>seq485
Length=8713404
Score = 96.9 bits (106), Expect = 3e-14
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 131176 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 131235
||| || || ||| | ||||| || ||||| || |||||| | ||| | | | |||||
Sbjct 3173573 TGTTGTGGCTACAGTGGCATTCGGAATGGGCATCAATAAAGCAGATATCCGGATGGTTAT 3173514
Query 131236 TCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 131295
||||||||| || || ||| | || ||| ||||||||||||||||| ||||| |||||
Sbjct 3173513 TCATTACGGTGCCCCTAAGGAAATGGAATCCTATTATCAAGAAATTGGGAGAGCTGGTCG 3173454
Query 131296 TGATGG 131301
||| ||
Sbjct 3173453 TGACGG 3173448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740580175023198
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |