Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq841 96.9 3e-15
seq396 87.8 2e-12
>seq841
Length=5312791
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 137194 AAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTC 137253
|| |||| || | ||| | || ||||| || || |||||||| || || |||| |
Sbjct 4754218 AAGCGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGC 4754277
Query 137254 GAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 137313
||||| || || || ||||| ||||||| | ||||||||||| || ||||||||
Sbjct 4754278 CCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCC 4754337
Query 137314 TTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTC 137373
||||| || || |||| | || | ||||| |||| || || |||| |||
Sbjct 4754338 TTGTCCTGGATCTTGGCCTTTACATTCTCGATGGTGTCACTGGGCTCAACCTCAAGAGTG 4754397
Query 137374 ACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
| ||||||||||||| || || || || || |||||
Sbjct 4754398 ATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 4754435
Score = 82.4 bits (90), Expect = 7e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 137194 AAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTC 137253
|| |||| || | ||| | || ||||| || || |||||||| || || |||| |
Sbjct 4753372 AAGCGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGC 4753431
Query 137254 GAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 137313
||||| || || || ||||| ||||||| | |||||||| || || ||||||||
Sbjct 4753432 CCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCC 4753491
Query 137314 TTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTC 137373
||||| || || || | | || | ||||| |||| || ||||| | ||
Sbjct 4753492 TTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACTTCTAGGGTG 4753551
Query 137374 ACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
| ||||||||||||| || || || || || |||||
Sbjct 4753552 ATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 4753589
>seq396
Length=9930490
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243
|||||| | | |||| || | ||| | || ||||| || || |||||||| ||
Sbjct 5100964 GCCTCCCCTCAGGCGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGA 5100905
Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303
|| |||| |||||| || || || |||||| ||||||| | ||||||||||| ||
Sbjct 5100904 CAAGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGG 5100845
Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363
|||||||| ||||| || || || | | || | ||||| |||| || ||
Sbjct 5100844 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAAC 5100785
Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|||| || | |||||||| |||| || || || || || |||||
Sbjct 5100784 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAAATCTGCAT 5100737
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256
|||| || | ||| | || ||||| || || |||||||| || || |||| |
Sbjct 5101179 CGCAGCACAAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCG 5101120
Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316
||||| || || || |||||| ||||||| | ||||||||||| || |||||||| |||
Sbjct 5101119 TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTG 5101060
Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376
|| || || || | | || | ||||| |||| || || |||| || |
Sbjct 5101059 TCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATG 5101000
Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|||||||| |||| || || || || || |||||
Sbjct 5100999 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 5100965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488537752743600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |