Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq841 136 4e-27
seq396 129 6e-25
seq537 95.1 1e-14
seq165 84.2 2e-11
>seq841
Length=5312791
Score = 136 bits (150), Expect = 4e-27
Identities = 153/205 (75%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516
||| | |||||| || ||||| || ||||| || || ||| | || || |||||
Sbjct 4753386 ATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTG 4753445
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
|||||| ||| | || |||| |||||| || || || |||||||||||||| ||||||
Sbjct 4753446 CTTGCCAGCGAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTT 4753505
Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
||||| | ||||| ||||| ||||||| || || | ||||| ||| ||||||||
Sbjct 4753506 GGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACTTCTAGGGTGATGGTCTTGCCGGT 4753565
Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661
||| || || || || |||||||||
Sbjct 4753566 CAGGGTCTTCACAAAGATCTGCATG 4753590
Score = 125 bits (138), Expect = 7e-24
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516
||| | |||||| || ||||| || ||||| || || ||| | || || |||||
Sbjct 4754232 ATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTG 4754291
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
|||||| ||| | || |||| |||||| ||||| || |||||||||||||| ||||||
Sbjct 4754292 CTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTT 4754351
Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
||| | | ||| | ||||| ||||||| || || | |||| ||| ||||||||
Sbjct 4754352 GGCCTTTACATTCTCGATGGTGTCACTGGGCTCAACCTCAAGAGTGATGGTCTTGCCGGT 4754411
Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660
||| || || || || ||||||||
Sbjct 4754412 CAGGGTCTTCACAAAGATCTGCAT 4754435
Score = 96.9 bits (106), Expect = 3e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516
||| | |||||| || ||||| || ||||| ||| || ||| | || || |||||
Sbjct 4753614 ATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTG 4753673
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
|||||| ||| | || |||| |||||| || || || |||||||||||||| ||||||
Sbjct 4753674 CTTGCCAGCGAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTT 4753733
Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCAC 133612
||||| | ||||| ||||| ||||||| ||
Sbjct 4753734 GGCCTTGACATTCTCAATGGTGTCACTGGGCTCAAC 4753769
>seq396
Length=9930490
Score = 129 bits (142), Expect = 6e-25
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516
||| | |||||| || ||||| || ||||| || || ||| ||| || |||||
Sbjct 5100940 ATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGTCCGTCTTCCAGCTG 5100881
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
|||||| || | || |||| |||||| ||||| || |||||||||||||| ||||||
Sbjct 5100880 CTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTT 5100821
Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
||| | | ||||| ||||| ||||||| || || | ||||| ||| ||||| ||
Sbjct 5100820 GGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGT 5100761
Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660
||| || || || |||||||||||
Sbjct 5100760 CAGGGTCTTCACAAAAATCTGCAT 5100737
Score = 123 bits (136), Expect = 2e-23
Identities = 148/201 (74%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
||||| || ||||| || ||||| || || ||| ||| || |||||||||||
Sbjct 5101161 GTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCGTCTTCCAGCTGCTTGCCA 5101102
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
|| | || |||| |||||| ||||| || |||||||||||||| |||||| |||
Sbjct 5101101 GCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 5101042
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | ||||| ||||| ||||||| || || | ||||| ||| ||||| ||||| ||
Sbjct 5101041 ACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTC 5100982
Query 133644 TTTACGAAAATCTGCATGGCT 133664
|| || || ||||||||| ||
Sbjct 5100981 TTCACAAAGATCTGCATGCCT 5100961
>seq537
Length=7949590
Score = 95.1 bits (104), Expect = 1e-14
Identities = 87/110 (79%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 148866 TACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTG 148925
||||| || || || | |||||||||||||| ||||| || | |||| ||||||
Sbjct 7423611 TACTCCACTATTTCTGTACACAGATTGCTGCACTTGATGGTCCCTAAGTTCCGCTGATTG 7423552
Query 148926 CTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTC 148975
||||| | |||||||| ||| |||||||||||||||||| |||||| ||
Sbjct 7423551 CTCTTCCGGTTGCACGAGTCTTTGTACAGCATGTACGGTGTGCCAGTCTC 7423502
>seq165
Length=2051013
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 133557 CCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCG 133616
|||||||| || |||||| ||||| | ||| | ||||||| |||||||||| ||
Sbjct 1965300 CCTTCCTTATCCTGGATCTTGGCCTTGACGTTCTCGATCGTGTCGTTGGGCTCCACCTCC 1965359
Query 133617 ACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| ||||| |||||| || ||||| || || || |||||||||||
Sbjct 1965360 AGGGTGATGGTTTTACCCGTCAGCGTCTTGACAAAAATCTGCAT 1965403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483414618256520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |