Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq340 100 3e-16
>seq340
Length=24413552
Score = 100 bits (110), Expect = 3e-16
Identities = 242/359 (67%), Gaps = 8/359 (2%)
Strand=Plus/Plus
Query 162629 CCTTCAGCTGACGCACCATCTCTAGATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGAT 162688
||||||| ||| || ||||| | |||||||| | ||| || || ||||||||| |
Sbjct 5936436 CCTTCAGGGCACGGACGATCTCGATGTTGGTCTTGATGGGGAAATCAGTGCCGCAGGTGT 5936495
Query 162689 TAATAACATATTTCCACTTAACGCTGAGTCCGTA-CAGATCCTGTAGACAGTTCAGATCG 162747
| | || || |||| | | | |||| | ||| ||||| | ||||| || ||
Sbjct 5936496 TGAGGACGTAGCGCCACGGCATGGGGC-TCCGCAGCAGGTCCTGCATGCAGTTGAGGTCA 5936554
Query 162748 GCCTGGACGCGACTCCACGACGCGTACACGACGCTCT-CCAACCTAGTGGCGACAAAGAC 162806
||||| | || ||| || || ||||| || |||| |||| | | || ||||||||
Sbjct 5936555 GCCTGCAGCCGGGACCAGGAGGCATACACCAC-CTCTTCCAAGCGGCTCGCCACAAAGAC 5936613
Query 162807 ATTGTCGAAACACGAAACTATCCCCATCACGGCCAGTGAGAA--CATCGGGTCCGCTTTC 162864
||| ||| || | | || || ||||||| | ||| | | || | ||
Sbjct 5936614 GTTGCGGAAGCAGGCTGCGATGGCCCGCACGGCCTCTTGGAAGGCGGCCGGG--GACTTG 5936671
Query 162865 CTATCTACGTGTACGCAGTATAGATTCTGAGGGGCGTAGATGGCCCTCAGTAATCTCTCG 162924
|| || | ||| |||||||| | ||||| |||||||||| || | ||| | | |||
Sbjct 5936672 CTGTCAATGTGGACGCAGTAGACGTTCTGGGGGGCGTAGAGGGAGCGCAGGAGCCGCTCA 5936731
Query 162925 AACATCTCTATCTTATGGTGTACCACGATAGAATACGCTATGGGGAACTCAGCCTCCTC 162983
||||| || || || | ||| | || || || || || ||||||||||| ||||||||
Sbjct 5936732 AACATGTCGATTTTGTTGTGGATGACCATGGAGTAGGCGATGGGGAACTCCGCCTCCTC 5936790
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578424603300800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |