Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq513 123 8e-25
seq409 123 8e-25
seq379 123 8e-25
seq291 123 8e-25
seq954 118 3e-23
seq323 114 4e-22
seq841 100 9e-18
seq627 98.7 3e-17
seq165 98.7 3e-17
seq322 82.4 2e-12
>seq513
Length=16486
Score = 123 bits (136), Expect = 8e-25
Identities = 71/73 (97%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 14250 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 14309
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 14310 CCCGGGCTTCAGC 14322
>seq409
Length=10173
Score = 123 bits (136), Expect = 8e-25
Identities = 71/73 (97%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 5978 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 5919
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 5918 CCCGGGCTTCAGC 5906
>seq379
Length=30036
Score = 123 bits (136), Expect = 8e-25
Identities = 71/73 (97%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 12224 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 12283
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 12284 CCCGGGCTTCAGC 12296
>seq291
Length=175695
Score = 123 bits (136), Expect = 8e-25
Identities = 71/73 (97%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 94733 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 94792
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 94793 CCCGGGCTTCAGC 94805
>seq954
Length=4320062
Score = 118 bits (130), Expect = 3e-23
Identities = 70/73 (96%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3349420 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAG 3349479
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 3349480 CCCGGGCTTCAGC 3349492
Score = 118 bits (130), Expect = 3e-23
Identities = 70/73 (96%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3360742 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAG 3360683
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 3360682 CCCGGGCTTCAGC 3360670
>seq323
Length=73046
Score = 114 bits (126), Expect = 4e-22
Identities = 69/73 (95%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 34493 GGTTGAAGTAGCTCAGCTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAGC 34434
Query 2828 CCCGGGCTTCAGC 2840
|| ||||||||||
Sbjct 34433 CCTGGGCTTCAGC 34421
>seq841
Length=5312791
Score = 100 bits (110), Expect = 9e-18
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 4759146 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 4759087
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 4759086 CCCGGGTTTCGGC 4759074
>seq627
Length=6852163
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 86365 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 86306
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 86305 CCGGGTTTCGGC 86294
>seq165
Length=2051013
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 1026916 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1026857
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 1026856 CCGGGTTTCGGC 1026845
>seq322
Length=82665
Score = 82.4 bits (90), Expect = 2e-12
Identities = 59/68 (87%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
||||||| ||||||| |||||||| ||||| |||||| |||||||||||||| |||| |
Sbjct 54267 GCTGAAGAAGCTCAGCTGGGAGAGTGTTAGAGTGAAGACCTAAAGGTCCCTGGCTCAAGC 54326
Query 2829 CCGGGCTT 2836
|| |||||
Sbjct 54327 CCAGGCTT 54334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15849422657835
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |