Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq396 127 2e-24
seq841 113 4e-20
>seq396
Length=9930490
Score = 127 bits (140), Expect = 2e-24
Identities = 145/195 (74%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| || | |||||| || |||| ||||||||||| || |||||
Sbjct 5100927 TCCTTCTGGATGTTGTAGTCAGACAAGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAG 5100868
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || |||||| || | |||| || ||||||||| |||||| ||||| | |
Sbjct 5100867 ATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTC 5100808
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | || ||||| | ||||| || || || |||| || ||||||
Sbjct 5100807 TCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 5100748
Query 35726 AATATCTGCATTCTG 35740
|| ||||||||| ||
Sbjct 5100747 AAAATCTGCATTTTG 5100733
Score = 120 bits (132), Expect = 3e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| || | || ||| || |||| ||||||||||| || |||||
Sbjct 5101155 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAG 5101096
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || |||||| || | |||| || ||||||||| |||||| ||||| | |
Sbjct 5101095 ATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTC 5101036
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | || ||||| | ||||| || || || |||| || ||||||
Sbjct 5101035 TCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 5100976
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 5100975 AAGATCTGCAT 5100965
>seq841
Length=5312791
Score = 113 bits (124), Expect = 4e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| || | || ||| ||| | || ||||||||||| || || ||
Sbjct 4754245 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCGAAG 4754304
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || |||||| || | |||| || ||||||||| |||||| ||| | | |
Sbjct 4754305 ATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACATTC 4754364
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | || ||||| | ||||| || || || |||| || ||||||
Sbjct 4754365 TCGATGGTGTCACTGGGCTCAACCTCAAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACA 4754424
Query 35726 AATATCTGCATT 35737
|| |||||||||
Sbjct 4754425 AAGATCTGCATT 4754436
Score = 105 bits (116), Expect = 6e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| || | || ||| ||| | || ||||||||||| || || ||
Sbjct 4753399 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCGAAG 4753458
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || |||||| || | |||| || ||||||||| |||||| ||| | | |
Sbjct 4753459 ATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTC 4753518
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | || || || | ||||| || || || |||| || ||||||
Sbjct 4753519 TCAATGGTGTCACTGGGCTCAACTTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACA 4753578
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 4753579 AAGATCTGCAT 4753589
Score = 86.0 bits (94), Expect = 6e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| |||| || ||| ||| | || ||||||||||| || || ||
Sbjct 4753627 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCGAAG 4753686
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652
|||| || |||||| || | |||| || ||||||||| ||||||
Sbjct 4753687 ATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTT 4753733
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450787835476840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |