Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq218 118 8e-22
seq429 95.1 1e-14
>seq218
Length=12993727
Score = 118 bits (130), Expect = 8e-22
Identities = 91/108 (84%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 43913 CAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAAT 43972
|||||||| ||| | ||||||| || ||||| ||||| ||||| |||||||| ||||||
Sbjct 5721337 CAAGAAGTACAAATCACAGAAGCTCGCTGTTTCTATGGCTTTCAGATTGCCATGGAAAAT 5721278
Query 43973 ATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020
|| ||||| ||||||||||||||||| || || || ||||| ||||||
Sbjct 5721277 ATACATTCAGAAATGTACAGTCTTCTTATTGACACCTACATTAAAGAT 5721230
>seq429
Length=9448605
Score = 95.1 bits (104), Expect = 1e-14
Identities = 115/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106
||||||| |||| || || ||| | || ||||| || ||| || |||||| |||
Sbjct 340099 TGATGGCTCTGCCTCCATGCCATGCCCTTTGCCAGTTCTATGTTCTAAACGGTGAATTGT 340040
Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166
| || ||| | ||||| || || || || ||||||||||| || || || || || || |
Sbjct 340039 CTTGCCAACTCTATCAGAGGTCTGGAGATATGGGACTAGGAGTGCCTTTCAATATTGCCA 339980
Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACACGTTAC 41203
| ||| | |||||||| || |||||||| || || ||
Sbjct 339979 GCTATTCACTGCTCACTTACATGATTGCCCATGTCAC 339943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397451044593115
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |