Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq556 82.4 1e-10
seq537 82.4 1e-10
>seq556
Length=21056529
Score = 82.4 bits (90), Expect = 1e-10
Identities = 94/124 (76%), Gaps = 2/124 (2%)
Strand=Plus/Minus
Query 122678 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCT 122737
||||||||| | |||||||||||| ||||| || || ||||| || |||| |||||
Sbjct 17129626 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCT 17129567
Query 122738 TCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796
||| |||| | ||||| ||| || || || || |||||||| || || || |||||
Sbjct 17129566 TCAGCCAAAATATAGCAGCA-AAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAA 17129508
Query 122797 GCAA 122800
||||
Sbjct 17129507 GCAA 17129504
>seq537
Length=7949590
Score = 82.4 bits (90), Expect = 1e-10
Identities = 110/153 (72%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324
|||||| || || ||||| | ||||||||||| | ||| | ||| || |||||
Sbjct 7423627 CTCATCTTTGCTGGTATACTCCACTATTTCTGTACACAGATTGCTGCACTTGATGGTCCC 7423568
Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384
|| ||| || || |||||| |||||||| || ||||| |||||||| || || ||
Sbjct 7423567 TAAGTTCCGCTGATTGCTCTTCCGGTTGCACGAGTCTTTGTACAGCATGTACGGTGTGCC 7423508
Query 111385 CGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417
||||| ||||| |||| | ||||| | |||
Sbjct 7423507 AGTCTCTGTCTGGGATTCAATGATAGCGTACCA 7423475
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628023969040800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |