Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq340 291 1e-73
seq374 145 1e-29
>seq340
Length=24413552
Score = 291 bits (322), Expect = 1e-73
Identities = 669/999 (67%), Gaps = 14/999 (1%)
Strand=Plus/Minus
Query 13600 CGCCGGGAGACTACGTGAACATGACGGCCGACTGCGTGGCCTTCGTGAAAGACAGGGGGT 13659
|||| || || ||| |||||||||| |||||| |||| | | ||| || |
Sbjct 5936873 CGCCCGGCGAGTACCTGAACATGACTAAGGACTGCAGCAACTTCAAGGA-GACCCGGCGA 5936815
Query 13660 ATC-TCGTGAGGCCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTG 13718
|| ||| | || ||||||| ||| |||| ||||| |||||||||||||| || ||
Sbjct 5936814 TTCATCGAGTTCCCGCTGAGCCAGGAGGAGGCGGAGTTCCCCATCGCCTACTCCATGGTC 5936755
Query 13719 ATCCACCACAAGATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAAC 13778
|||||| |||| ||||| ||||| ||||| |||||| | || |||||||||| ||||||
Sbjct 5936754 ATCCACAACAAAATCGACATGTTTGAGCGGCTCCTGCGCTCCCTCTACGCCCCCCAGAAC 5936695
Query 13779 CTCTACTGCGTCCACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCC 13838
|||||||||||||| | ||| ||||||| | || ||| || ||| ||||
Sbjct 5936694 GTCTACTGCGTCCACATTGACAGCAAGTCCCCGGCCGCCTTCCAAGAGGCCGTGCGGGCC 5936635
Query 13839 ATCGCCAGGTGCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGC 13898
||||| ||||||| ||||| |||| ||| || | || |||||||| | |
Sbjct 5936634 ATCGCAGCCTGCTTCCGCAACGTCTTTGTGGCGAGCCGCTTGGAAGAGGTGGTGTATGCC 5936575
Query 13899 TCCTGGAGTCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTC 13958
|||||| || ||||||| ||||||| ||||||| ||||||| |||| |
Sbjct 5936574 TCCTGGTCCCGGCTGCAGGCTGACCTCAACTGCATGCAGGACCTGCTGCGGAGCCCCATG 5936515
Query 13959 AAGTGGAGGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAG 14018
|||| | ||| | |||||| ||||| | || ||||| ||||||||||| | |||
Sbjct 5936514 CCGTGGCGCTACGTCCTCAACACCTGCGGCACTGATTTCCCCATCAAGACCAACATCGAG 5936455
Query 14019 ATCGTGCGGGCGCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAG--AGCGAGGGCATGC 14076
||||| || || ||||||| ||| || ||||| | ||||| | || ||| |
Sbjct 5936454 ATCGTCCGTGCCCTGAAGGTGCTGCAGGGGCAGAACAGCATGGAGTCGGAGAAGGCCT-- 5936397
Query 14077 CCAACCACAAGCTGCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGG 14136
| || ||||| | | ||| || | |||| |||| || | | |
Sbjct 5936396 CGGGCCCCAAGCAGGAGCGCTGGCGGTACCACCACGAAGTGG-----GGAAG-TTCATCT 5936343
Query 14137 TCAACACCGGCAGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACG 14196
|| || | || | || | ||||| |||| || ||||| || |||| ||||
Sbjct 5936342 TCCGGACAGCCACAGAGAAACCGCCGCCACCGCACAACTATCCCATGTTCACGGGCAACG 5936283
Query 14197 CTTACTTTGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCC 14256
| ||| ||| |||||| |||| |||||| | | | || | || || ||| | |
Sbjct 5936282 CGTACATTGTGGTCACACGGGCCTTCGTGCAGTACATCTTTGAGAACCCCACGGCGCAGC 5936223
Query 14257 TGCTCATGCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGC 14316
| || | | ||| | ||||||| |||||||||||||| ||| | ||||||||| |
Sbjct 5936222 AGTTCCTCGAGTGGGCCAAGGACACCTACAGCCCCGACGAACACGTCTGGGCCACCCTCA 5936163
Query 14317 AGAGAATGTACGGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACA 14376
| | ||| ||| ||| || | || ||| | | ||||| | | ||||||||
Sbjct 5936162 ACCGCATGCCCGGCGTGCCGGGCGCCATGCCCCAGAATGACAAGTTCCAGCTCTCGGACA 5936103
Query 14377 TGTGGGCCAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGG 14436
|| ||| | | | | ||||||||||| ||| ||||| || | || || || |
Sbjct 5936102 TGAACGCCCTGCCCCGCCTGGTCAAGTGGCAGTACCTGGAGGGCGACACCAGCAAGGGCG 5936043
Query 14437 CCCTGTACCCGCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCG 14496
| | |||||||| |||| |||| ||| | |||| ||||||||| |||| | ||||
Sbjct 5936042 CGCCCTACCCGCCCTGCGCCGGCCAGCACCAGCGCGCCGTCTGCATCTACGGGGCGGGCG 5935983
Query 14497 ACGTGAAGTGGCTG-AAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACG 14555
||||| |||||| ||| | | ||||| || ||||||||||||||| | |
Sbjct 5935982 ACGTGCCCTGGCTGCTCCAGCAGCAC-CACCTCTTGGCCAACAAGTTCGACCCCCTCGTG 5935924
Query 14556 GACGAGTTCGCCGTGCGCTGTCTGGACGAGGACGTGCGC 14594
||| | |||| | | ||||| || ||| || |||||
Sbjct 5935923 GACAACGCCGCCATCCAGTGTCTCGAGGAGCACCTGCGC 5935885
>seq374
Length=9903747
Score = 145 bits (160), Expect = 1e-29
Identities = 257/367 (70%), Gaps = 12/367 (3%)
Strand=Plus/Minus
Query 13695 TTTCCCATCGCCTACTCGATCGTGATCCACCACAAGA---TCGAGATGTTCGAGCGCCTC 13751
|| ||||||||||| || ||| || |||||| |||||| |||||||| |||
Sbjct 5206095 TTCCCCATCGCCTATG---TCATGACCCTGCACAAGGAGTTCGAGACCTTCGAGCGGCTC 5206039
Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTC--CG 13809
| | || ||||| || || ||| |||||||||||||||||||| ||||| | ||
Sbjct 5206038 TTCCGCGCGGTCTACATGCCCCAAAACGTCTACTGCGTCCACGTGGACGCCAAGGCGCCG 5205979
Query 13810 GCGACGAGTTCATCCGGGGCGTCTCGGC-CATCGCCAGGTGCTTCCCTAACGTGGCCCTG 13868
|| | | || | || | ||| |||| | | | | |||||||| |||| |||
Sbjct 5205978 GCCCCCT-TCCAGCAGGCG-GTC-CGGCGCCTGGTGGGCTGCTTCCCCAACGCCTTCCTC 5205922
Query 13869 GCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGC 13928
||| |||| || | ||||| |||||| | | ||| ||| ||||||||||
Sbjct 5205921 GCCTCCCGGGTGGAGCGGGTGGTCTACGGCGGCGTGTCCCGCCTGCGGGCCGACCTCCAT 5205862
Query 13929 TGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGGG 13988
|||||| | |||||| ||||| | || ||| | |||||||||||| || ||
Sbjct 5205861 TGCATGGCAGACCTGCTGGCCTCGGCTGTGCCCTGGCGCTACCTGCTCAACACCTGTGGC 5205802
Query 13989 ATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCCCTGGGCGGC 14048
||||||||| | |||||||||| ||||||||| ||| |||||||| ||| || ||
Sbjct 5205801 CAGGACTTCCCCTTGAAGACCAACCGGGAGATCGTCCGGCTGCTGAAGGGCCTCGGGGGG 5205742
Query 14049 AAGAACG 14055
|||||||
Sbjct 5205741 AAGAACG 5205735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658730776372480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |