Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08- 04] 1,023 sequences; 1,178,409,481 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq429 102 6e-17 >seq429 Length=9448605 Score = 102 bits (112), Expect = 6e-17 Identities = 136/184 (74%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||| || |||| |||||||| || |||||||| ||||| || || || ||||||| || Sbjct 343572 CATATCTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATC 343631 Query 27549 TCCCTCTTCCCTG-TGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 27607 ||||| || ||| |||| ||| ||| ||| |||| || || | || || || || | Sbjct 343632 CCCCTCCTCTCTGGTGCT-GAAACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCAT 343690 Query 27608 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 27667 |||| ||||| || || || | ||||||||||||| || || || || || || || | Sbjct 343691 CCCAAATCTTCACACCTTTTGCAGAGAGCTCTTTGGCATTCGTAGAACC-CT-ACAAAAC 343748 Query 27668 ACAG 27671 |||| Sbjct 343749 ACAG 343752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369502593053513