Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_033176.1
Length=224064
Score E
Sequences producing significant alignments: (Bits) Value
seq731 143 4e-29
seq307 116 5e-21
>seq731
Length=6069190
Score = 143 bits (158), Expect = 4e-29
Identities = 223/315 (71%), Gaps = 3/315 (1%)
Strand=Plus/Plus
Query 8289 GGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGC 8348
|||| || | || ||||| || || |||||| | |||| || ||| | | ||
Sbjct 4073388 GGAAAGCAGTGAAAGGACAGCCTTTCACGTTGTTGCAGATGAGCTTCTGTAAGGAGGCAG 4073447
Query 8349 TCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGG 8408
| |||| || | || ||||| | ||| || |||||||| |||||||||||| | ||||
Sbjct 4073448 TATTGATTATTTCAAAGCCCACTTTTCCACCAAAGGTGCTAGGCTTCCAGTACTCAGGGG 4073507
Query 8409 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGC 8468
||||||| | || |||| || ||||| || ||||| || || || | ||| | ||
Sbjct 4073508 AGCAGATAGCATTTCCCATCAGTCCTTTCAGAGAGAATGGTGCTCCAATCTCCACCATTG 4073567
Query 8469 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAA-TCCGGTGTACAGCTCC 8527
| ||||| ||||| || || || |||||||| | |||||| || | ||||||||||
Sbjct 4073568 TTTCACCAAAGATTGCACCTGGTCGTGGCTTTTCTA-CAAGAAGGCCTGGGTACAGCTCC 4073626
Query 8528 ACAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT- 8586
| ||| || | ||| || ||||| | ||||| || || || || |||||||||||
Sbjct 4073627 ATAGCATCAATGTCGCCATAAAGCTCTTCCAGTTCAGCTGCCATTTCTTTTTCTCCTGTA 4073686
Query 8587 TTTATTAATAAAAAA 8601
||||| || | |||
Sbjct 4073687 ATTATTGATGAGAAA 4073701
Score = 143 bits (158), Expect = 4e-29
Identities = 177/242 (73%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 9244 ATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGA 9303
||||| | | | || |||||||| ||||| ||| ||| |||||||| || ||||||||
Sbjct 4075393 ATGAGCCTACTAGTTTGGAACAGCTGCTCATCATCCCACTCTGGATGCTCCTGTTTCAGG 4075452
Query 9304 ACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGT 9363
| || || |||| |||||||||||| ||||| || || || |||||||| | || ||
Sbjct 4075453 ATGTCACAGACCCGGTTGTGTTCCCTCAGCCATATTGTAGCATACATCATCAAGCCTGGG 4075512
Query 9364 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGA 9423
|||| || || |||| || || |||| | ||| || ||| || || | |||||
Sbjct 4075513 ACCAAACCGAACACCTCCTGCCCAACAGAAAACTGCAGGTGTTCAGGTACATGAGGAGGG 4075572
Query 9424 TAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATC 9483
|||||||| | |||| ||| || || | || ||||||||||| || || ||||||
Sbjct 4075573 TAGATCATATCTGCCTGAGTGTCCTTCACTGTTGGTGGATACATTTCTCCATCGATCATC 4075632
Query 9484 TG 9485
||
Sbjct 4075633 TG 4075634
>seq307
Length=10662554
Score = 116 bits (128), Expect = 5e-21
Identities = 182/255 (71%), Gaps = 4/255 (2%)
Strand=Plus/Plus
Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291
|| ||||| | |||||| |||| |||||||| || |||||||| ||||| |||||
Sbjct 1116773 TCACCGATGAGGATGAGACGAGCCGTCTGGAAGAGCTGCTCGTCGCTCCAGGTGGGATGC 1116832
Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351
|| ||||||| | || || || | |||||| || | ||||||| |||||||||||
Sbjct 1116833 TCCCGTTTCAGTATGTCACAGACGCGGTTGTGCTCGCGCAGCCAGAGCGTGGCGTACATG 1116892
Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGC 9411
|||||| || | || ||||| |||| || || | ||||| || | | | |||
Sbjct 1116893 CAGAGCCCCGGCAGAAGCCCAAACACCTCCTGGCCCATCGCCAGCTGCTTCTCCTTGGGG 1116952
Query 9412 ACTTCGGGA-GGATAGATCATGTGCACCTGGA-CGTCTTTGACCGAGGGGGGATACATTT 9469
| | | ||| || |||| |||||| | ||||| | || |||||| |||||| |||| |
Sbjct 1116953 A-TGCTGGACGGGTAGACCATGTG-AACTGGAGCATCGGTGACCGTGGGGGGGTACACCT 1117010
Query 9470 CACCGTCAATCATCT 9484
| || || | || ||
Sbjct 1117011 CTCCATCCACCACCT 1117025
Score = 96.9 bits (106), Expect = 5e-15
Identities = 127/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 8372 TCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGG 8431
||||| ||||| || ||||| ||||||||| | |||||||||||| ||| | | ||
Sbjct 1114399 TCTCCACCGAATGTACTGGGTTTCCAGTACTCTGGGGAGCAGATGGGGTTTCCAAGAAGC 1114458
Query 8432 CCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGA 8491
|| || ||||| |||||||| || | ||| | ||||| || || || || | |||||
Sbjct 1114459 CCCTTCAGGGAAAACGGAGCTCCGATCTCCACCATGCTTTCCCCAAAAATACCATTGGGT 1114518
Query 8492 CGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTA 8547
|||| || || | || || || | || | ||||| ||| || | |||||| ||
Sbjct 1114519 TGGGGTTTCTCAAGCAGCAAGCCCGGATAAAACTCCAGAGCATCAATGTCTCCATA 1114574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716867632937920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |