Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq841 132 1e-25
>seq841
Length=5312791
Score = 132 bits (146), Expect = 1e-25
Identities = 161/217 (74%), Gaps = 7/217 (3%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || || ||||| || || || || || || ||||| || ||||| ||
Sbjct 4754438 AAAATGC---AGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACTCTTGAGGTTGA- 4754383
Query 177975 AGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTC 178032
|| ||| ||||||||||||| || || ||||| |||||||| ||||| || || |
Sbjct 4754382 -GCCCAGTGACACCATCGAGAATGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCC 4754324
Query 178033 CGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCG 178092
| || ||||| | || |||||||| || || ||||| |||||||| | || || | |
Sbjct 4754323 CCGATCAGCAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCTG 4754264
Query 178093 ATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
| || ||| |||| || ||||| || |||||||||||
Sbjct 4754263 ACTACAACATCCAGAAGGAATCCACCCTGCATCTTGT 4754227
Score = 131 bits (144), Expect = 4e-25
Identities = 155/208 (75%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || ||||| || || || || || || |||||||| || || || || |||
Sbjct 4753586 CAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTAGAAGTTGA--GCCCAGTG 4753529
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||| ||||| ||||| |||||||| ||||| || || || || ||||
Sbjct 4753528 ACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAGC 4753469
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || |||||||| || || ||||| |||||||| | || || | || || |||
Sbjct 4753468 AGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 4753409
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || ||||| || |||||||||||
Sbjct 4753408 TCCAGAAGGAATCCACCCTGCATCTTGT 4753381
Score = 116 bits (128), Expect = 9e-21
Identities = 123/162 (76%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
|||||||| ||||| ||||| ||||| |||||||| ||||| || || || || |||
Sbjct 4753757 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 4753698
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| | || |||||||| || || ||||| |||||||| | || || |||| || |||
Sbjct 4753697 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 4753638
Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||| || ||||| || ||||||||||| || | || |||
Sbjct 4753637 ATCCAGAAGGAATCCACCCTGCATCTTGTGCTGCGTCTTAGA 4753596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203715422469462
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |