Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lonchura_20striata_20domestica_20[refseq_20GCF_5F002197715.1_202017- 06-19] 3,014 sequences; 1,060,169,706 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq2693 113 4e-20 >seq2693 Length=3874444 Score = 113 bits (124), Expect = 4e-20 Identities = 121/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTG 20457 || |||||||||||||| || ||| || ||||| || || ||| ||| ||||||| Sbjct 2854598 TTGATGGCTTTGCCTCCGTGCCATGCCCTTTGCCAGTTCTATGTTCTAAATGGTGAATTG 2854657 Query 20458 TCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCA 20517 || || ||| | ||||| | || | || ||||| || || || ||||| |||||||| Sbjct 2854658 TCTTGCCAACTCTATCAGAGGTCTGGAGACATGGGTCTAGGAGTGCCTTTTAATATTGCC 2854717 Query 20518 AGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 || ||| | ||||| ||||| |||||||| ||||| |||| Sbjct 2854718 AGCTATTCACTGCTCACGTACATGATTGCCCATGTCACAG 2854757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399169336724230