Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lonchura_20striata_20domestica_20[refseq_20GCF_5F002197715.1_202017-
06-19] 3,014 sequences; 1,060,169,706 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq2693 109 4e-19
>seq2693
Length=3874444
Score = 109 bits (120), Expect = 4e-19
Identities = 127/169 (75%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832
||| || |||| |||||||| |||| |||||||||||| || ||||| ||||| | ||
Sbjct 2851134 CATATCTTTGTATTCTGCTCCAAAATGCCTCCACTGGAAACCATACACTGGTCCCAAATC 2851075
Query 25833 TCCATCTTCCCTG-TGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891
|| || || ||| |||| ||| || |||||||| || || | || ||||| || |
Sbjct 2851074 ACCCTCCTCTCTGGTGCTGAAA-CCTTGCTTATCCAGGAACTCACGCGACCCATTAGCAT 2851016
Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940
|||| ||||| || || || | ||||||||||||| ||||| || ||
Sbjct 2851015 CCCAAATCTTCACACCTTTTGCAGAGAGCTCTTTGGCATTTGTAGAACC 2850967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340125105683022
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |