Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lonchura_20striata_20domestica_20[refseq_20GCF_5F002197715.1_202017-
06-19] 3,014 sequences; 1,060,169,706 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq1378 91.5 1e-13
>seq1378
Length=1476964
Score = 91.5 bits (100), Expect = 1e-13
Identities = 115/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047
|||||||| | || || || || | ||||| || | || ||| | || || ||| ||
Sbjct 1379762 AAAATGCAGATCTTCGTCAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCC 1379703
Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107
| |||||||||||| | |||||| ||||| ||||| |||||||| ||||| ||
Sbjct 1379702 AGTGACACCATCGAGAATGTCAAAGCCAAGATCCAGGACAAGGAAGGCATCCCTCCTGAC 1379643
Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA 24145
|| ||||| ||||| | | |||||||| || |||||
Sbjct 1379642 CAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGA 1379605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429920207107170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |