Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lonchura_20striata_20domestica_20[refseq_20GCF_5F002197715.1_202017- 06-19] 3,014 sequences; 1,060,169,706 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq2533 91.5 1e-13 >seq2533 Length=312810 Score = 91.5 bits (100), Expect = 1e-13 Identities = 77/95 (81%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||| ||||||||||||||||||| || ||| | || | ||| || |||||||| Sbjct 208682 AAGCCCCTTCCCTTGGCTGTGGTTTCACTGGATGGCAGGTGGGGACAGTGGGAATCTCGT 208741 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||| | | |||||||||||||||||| Sbjct 208742 TCATCCATTCATACACATCACTAATTAGATGACGA 208776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334934896342634