Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lonchura_20striata_20domestica_20[refseq_20GCF_5F002197715.1_202017-
06-19] 3,014 sequences; 1,060,169,706 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq281 86.0 4e-12
>seq281
Length=2586918
Score = 86.0 bits (94), Expect = 4e-12
Identities = 115/160 (72%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 34825 CATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCT 34884
|||| |||||||| || || ||||| || || | |||||||| | || | ||| ||||
Sbjct 2064616 CATCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATCCCTTCCT 2064675
Query 34885 TGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTA 34944
|||| ||||| || || | | || | |||| || ||| || || | ||| |
Sbjct 2064676 TGTCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCACTGGGCTCCACCTCAAGGGTGA 2064735
Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|||| || || || || |||||||||||||||||||| ||
Sbjct 2064736 TGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTT 2064775
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324621675193392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |