Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lonchura_20striata_20domestica_20[refseq_20GCF_5F002197715.1_202017-
06-19] 3,014 sequences; 1,060,169,706 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq2319 105 5e-17
>seq2319
Length=695921
Score = 105 bits (116), Expect = 5e-17
Identities = 111/146 (76%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450
||||| |||||||| | ||||| ||||| ||||| || ||||| || || || || ||
Sbjct 512783 GTTACCAATGCAGTAGTGACTGTCCCAGCCTATTTCAACGACTCCCAGCGCCAGGCCACG 512724
Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510
|||||||||||| |||||| || || || || || || || ||||| || || || ||
Sbjct 512723 AAAGATGCTGGAACTATTGCAGGGCTGAACGTCCTGCGAATCATCAACGAGCCCACAGCA 512664
Query 550511 GCTGCACTTGCATATGGACTTGATAA 550536
||||| |||| ||||| || || ||
Sbjct 512663 GCTGCCATTGCCTATGGGCTGGACAA 512638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029136606086860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |