Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lonchura_20striata_20domestica_20[refseq_20GCF_5F002197715.1_202017-
06-19] 3,014 sequences; 1,060,169,706 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq2693 98.7 8e-16
>seq2693
Length=3874444
Score = 98.7 bits (108), Expect = 8e-16
Identities = 117/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837
|| |||| || ||||||||||| ||||| || || || ||||| ||||| |||||
Sbjct 2854758 CCTGTGACATGGGCAATCATGTACGTGAGCAGTGAATAGCTGGCAATATTAAAAGGCACT 2854699
Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897
||||| ||||| ||||| || || ||||| || || || || | || | | | |||
Sbjct 2854698 CCTAGACCCATGTCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTTAGAACA 2854639
Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936
|| || || ||||| |||| || |||||||| ||||||
Sbjct 2854638 TAGAACTGGCAAAGGGCATGGCACGGAGGCAAAGCCATC 2854600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391931202613282
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |