Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lonchura_20striata_20domestica_20[refseq_20GCF_5F002197715.1_202017-
06-19] 3,014 sequences; 1,060,169,706 total letters
Query= NC_028238.1
Length=188534
Score E
Sequences producing significant alignments: (Bits) Value
seq2317 120 4e-22
>seq2317
Length=688720
Score = 120 bits (132), Expect = 4e-22
Identities = 114/143 (80%), Gaps = 2/143 (1%)
Strand=Plus/Minus
Query 32962 TGCAGTTTCATTTAGCAATAGGTCATACAGCAATGTCTATATATATAGATTGTCCGTTCC 33021
||||||||||| | | || || || ||||| |||||||| ||||| |||||||| ||||
Sbjct 292924 TGCAGTTTCATGTGACTATTGGCCACACAGCCATGTCTATTTATATTGATTGTCCTTTCC 292865
Query 33022 CTAGATGGATACAGTGGGCTGTTATTATATATTCTATCACCTTTATCATCCTTTTTGGCA 33081
||| |||||| || |||| ||| ||| | ||| || ||||||| || |||| ||||| |
Sbjct 292864 CTAAATGGATGCACTGGGGTGTCATTTTCTATGCTGTCACCTTCATTTTCCTGTTTGGTA 292805
Query 33082 ACTTTTA-TCTCAGGACATATAA 33103
|||| || | || ||||||||||
Sbjct 292804 ACTTCTACTATC-GGACATATAA 292783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 603158075163360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |