Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyrurus_20tetrix_20tetrix_20[genbank_20GCA_5F000586395.1_202014-03- 08] 971,998 sequences; 657,025,294 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq430442 87.8 1e-12 >seq430442 Length=344 Score = 87.8 bits (96), Expect = 1e-12 Identities = 128/180 (71%), Gaps = 1/180 (1%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||| ||||| | || | || |||||||| ||||| || |||||||| ||| Sbjct 89 GTGACATGGGCTATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACTCCT 148 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 ||||||||||| | || || || || | || || || || | |||| || || Sbjct 149 AGTCCCATATCTCCAGACCTCTGGTACAGTTGGCAAGACAGTTCGCCATTTAGAACGTAG 208 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAA 97296 ||||| | | |||| || || ||||| ||||| | || |||||||| ||| ||| Sbjct 209 AACTGGCAAAGAGCATGGCAAGGTGGCAAGGCCATCAGAGAAATATCTAAGA-ATTACAA 267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 342675918492860