Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lyrurus_20tetrix_20tetrix_20[genbank_20GCA_5F000586395.1_202014-03-
08] 971,998 sequences; 657,025,294 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq291424 122 7e-23
seq291425 86.0 5e-12
>seq291424
Length=270
Score = 122 bits (134), Expect = 7e-23
Identities = 155/212 (73%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||||||||| ||||||||||| ||| ||| |||| ||||
Sbjct 215 CAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGCCCGTCTTCCA 156
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| || || || ||||| |||| || ||| || ||||| || | |||||||||||| |
Sbjct 155 GCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGGA 96
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || || || | | | | |||| | |||||||||| ||| || |||||||
Sbjct 95 TCTTGGCTTTGACATTCTCGATGGTGTCACTGGGTTCCACCTCCAAGGTGATGGTCTTGC 36
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
| ||||| |||||||| ||||| |||||||||
Sbjct 35 CAGTCAGGGTCTTCACGAAGATCTGCATGTTG 4
>seq291425
Length=203
Score = 86.0 bits (94), Expect = 5e-12
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| ||| ||||||||| ||||||||||| ||| ||| |||| |||
Sbjct 173 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGCCCGTCTTCC 114
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || || || || || |||| || ||| || ||||| || | ||||||||||||
Sbjct 113 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCCTCCTTGTCC 57
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 390395050041958
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |