Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyrurus_20tetrix_20tetrix_20[genbank_20GCA_5F000586395.1_202014-03- 08] 971,998 sequences; 657,025,294 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq291424 122 8e-23 seq186997 118 9e-22 >seq291424 Length=270 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 |||||||| || ||||| ||||| ||||| ||||| || |||||| | || || ||||| Sbjct 5 AACATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTGGAACCC 64 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 |||| |||| | |||||| | || ||||||||| ||| | || ||||| Sbjct 65 AGTGACACCATCGAGAATGTCAAAGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGAT 124 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||| | || || ||||||||||| ||| |||||||| ||| || || || Sbjct 125 CAGCAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGACGGGCGCACTCTGTCTGACTAC 184 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || || || || ||||| ||||| || || | ||||| || || Sbjct 185 AACATCCAGAAGGAGTCCACTCTCCATCTTGTCCTGCGCCTGAGAGGAGG 234 >seq186997 Length=774 Score = 118 bits (130), Expect = 9e-22 Identities = 116/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 23047 CACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGT 23106 ||||||||||||| || ||||| || ||||| || || || ||||| || || || || Sbjct 431 CACCTCGTCTTTGCTGGTATACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGT 490 Query 23107 GCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGT 23166 ||||| || ||| |||||||| | ||||| || || ||||| |||||||| || || Sbjct 491 CCCCAAGTTCTGCTGATTGCTTTTCCTGTTGCAAGAGTCTTTGTACAGCATGTAAGGGGT 550 Query 23167 GCCCGTCTCGACCTGCGACTCGATGATCGC 23196 ||| ||||| ||||||||||||||| || Sbjct 551 GCCAGTCTCTGTCTGCGACTCGATGATGGC 580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440350349384160