Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyrurus_20tetrix_20tetrix_20[genbank_20GCA_5F000586395.1_202014-03- 08] 971,998 sequences; 657,025,294 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq624763 87.8 2e-12 seq624761 86.0 7e-12 >seq624763 Length=1955 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 93164 CCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACG 93223 |||| |||||| |||||||| || || |||||| ||||||||| || || |||||||| Sbjct 946 CCTCTTTTCTTCAGCCAAAAAATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACT 887 Query 93224 GCTGCAAATGCCACAATACGTTC 93246 ||||||||||| || | |||||| Sbjct 886 GCTGCAAATGCTACTACACGTTC 864 >seq624761 Length=539 Score = 86.0 bits (94), Expect = 7e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| || || || | ||| |||||||| ||||| | ||| ||||| ||||| ||| Sbjct 363 ATGTACGTGTCAATAAGAAGACTGTACATTTCTGAATGTATATTTTCCATGGCAATCTGG 304 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGA 93463 || || |||||||| | ||||| ||||| |||||||||||| Sbjct 303 AAGCCATAGAAACAACGTGCTTCTGTGATTTGCACTTCTTGA 262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 550094955201520