Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lyrurus_20tetrix_20tetrix_20[genbank_20GCA_5F000586395.1_202014-03-
08] 971,998 sequences; 657,025,294 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq291424 114 3e-20
seq331414 87.8 4e-12
>seq291424
Length=270
Score = 114 bits (126), Expect = 3e-20
Identities = 155/215 (72%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321
|| || ||||| | ||| || || ||||| || ||||| | || ||||| ||||||
Sbjct 219 AGGACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGCCCGTCT 160
Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTA 288378
|| | || || || ||||||||||| | ||| || ||| ||| || || || ||
Sbjct 159 TCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTG---ATCGGGGGGAATGCCCTCCTTG 103
Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438
|||||||| || ||||| || || || || | || || | ||| || || | |||||
Sbjct 102 TCCTGGATCTTGGCTTTGACATTCTCGATGGTGTCACTGGGTTCCACCTCCAAGGTGATG 43
Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| || ||||| ||||| ||||| ||||||||
Sbjct 42 GTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 8
>seq331414
Length=254
Score = 87.8 bits (96), Expect = 4e-12
Identities = 116/161 (72%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||| | || || ||||| | ||| || || ||||| || ||||| |
Sbjct 170 CCACCCCTGAGGCGCAGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 111
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| |||||||| | || || || ||||||||||| | ||| ||| | ||
Sbjct 110 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCAGGAGGA 51
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTAT 288407
|| |||||||| |||||||| || || ||||| || || ||
Sbjct 50 ATGCCTTCTTTGTCCTGGATCTTGGCCTTCACATTCTCAAT 10
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1164963309244644
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |