Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyrurus_20tetrix_20tetrix_20[genbank_20GCA_5F000586395.1_202014-03- 08] 971,998 sequences; 657,025,294 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq511515 194 2e-44 >seq511515 Length=2794 Score = 194 bits (214), Expect = 2e-44 Identities = 367/540 (68%), Gaps = 0/540 (0%) Strand=Plus/Minus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || || ||||| || || || | || |||| ||||| ||||| || Sbjct 1167 GCACCATAAGCCACGGCTTCATCAGGATTGATGCTCTTGTTCAACTCTTTGCCGTTGAAG 1108 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 | || | || || ||||| || ||||| || || || || || |||| ||||| Sbjct 1107 AAGTCTTGCAGCAGTTTCTGAATCTTTGGGATGCGAGTAGAGCCCCCAACCAGCACGATG 1048 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | || || || | ||| | || || || | || || ||||| |||| Sbjct 1047 TCATGGATCTGTGACTTGTCCAGCTTGGCATCCCGCAGGGCCTTCTCCACAGGATCCAGG 988 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||||| ||| | ||| ||||| ||||| || | ||| |||||||| ||| Sbjct 987 GTGCCACGGAACAGGTCAGCATTCAGCTCCTCGAAACGAGCTCTGGTGATGGATGTGTAG 928 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || |||| || || || | ||||| |||||||| | | ||||| | || || | Sbjct 927 AAGTCAATACCCTCATAGAGAGAATCGATTTCAATACTGGCTTGTGTGCTTGATGACAGG 868 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || |||||||| || |||||||| || || | ||||||| || | | ||| | Sbjct 867 GTACGCTTTGCACGTTCACACGCAGTACGAAGGCGACGAACTGCTCTCTTGTTCTCACTG 808 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 || |||||||| || || || || || || || |||||| | | | || Sbjct 807 ATGTCTTTCTTGTGCTTGCGCTTGAATTCAGCAATGAAGTGGTTGACCATACGGTTGTCA 748 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 |||||||| ||||||||||| || || || || || | ||| || |||||||| || || Sbjct 747 AAATCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGATTTCACCTCAAAGATGCCATCT 688 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 ||||| | | | || |||||||| || ||||| || ||||||||||| || |||||| Sbjct 687 TCAATAGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCAAAAATAAGAACGTTC 628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627415952358320