Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyrurus_20tetrix_20tetrix_20[genbank_20GCA_5F000586395.1_202014-03- 08] 971,998 sequences; 657,025,294 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq456222 84.2 4e-11 seq186997 84.2 4e-11 >seq456222 Length=339 Score = 84.2 bits (92), Expect = 4e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||| || |||| ||||||||||| || || |||||||| || ||||| ||||| Sbjct 188 GGTGAGAGGGTGGTTGCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCATTTGCT 129 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 || || || ||||| ||| ||| ||| ||||| || || |||||||| || || Sbjct 128 GCTATATTTTGGCTGAAGAAGAGGGGCCTAATGCCTGGATTGACTTTTTCCAATGAACTT 69 Query 25993 ATCAGCAGGGACGAGG 26008 || ||||| || |||| Sbjct 68 ATTAGCAGAGATGAGG 53 >seq186997 Length=774 Score = 84.2 bits (92), Expect = 4e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 221731 CACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGT 221790 ||||||||| ||| ||||||||| | || ||||| || ||||||||||| |||||||| Sbjct 431 CACCTCGTCTTTGCTGGTATACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGT 490 Query 221791 CCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACC 221850 ||||| || | ||||| || | ||| || ||| ||||| ||||| | || Sbjct 491 CCCCAAGTTCTGCTGATTGCTTTTCCTGTTGCAAGAGTCTTTGTACAGCATGTAAGGGGT 550 Query 221851 GCCAGTCTC 221859 ||||||||| Sbjct 551 GCCAGTCTC 559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917559358901120