Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lyrurus_20tetrix_20tetrix_20[genbank_20GCA_5F000586395.1_202014-03-
08] 971,998 sequences; 657,025,294 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq291424 132 5e-26
seq186997 96.9 3e-15
seq291425 93.3 4e-14
seq331414 89.7 5e-13
>seq291424
Length=270
Score = 132 bits (146), Expect = 5e-26
Identities = 148/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||| ||||| || ||||| || || ||| | ||| || |||||||||||
Sbjct 204 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGCCCGTCTTCCAGCTGCTTGCCA 145
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| | || |||| |||||| ||||| || ||||| |||||||| |||||| |||
Sbjct 144 GCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCTTTG 85
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | ||| | ||||| |||| ||||| || | ||||| ||| ||||| ||||| ||
Sbjct 84 ACATTCTCGATGGTGTCACTGGGTTCCACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTC 25
Query 133644 TTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 24 TTCACGAAGATCTGCATG 7
>seq186997
Length=774
Score = 96.9 bits (106), Expect = 3e-15
Identities = 92/118 (78%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 148866 TACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTG 148925
||||| || || || | |||||| |||||||||||||| |||| ||||| ||||||
Sbjct 450 TACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTCCCCAAGTTCTGCTGATTG 509
Query 148926 CTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCG 148983
|| || |||||||| | ||| |||||||||||||| || |||||| || |||||
Sbjct 510 CTTTTCCTGTTGCAAGAGTCTTTGTACAGCATGTAAGGGGTGCCAGTCTCTGTCTGCG 567
>seq291425
Length=203
Score = 93.3 bits (102), Expect = 4e-14
Identities = 117/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||| ||||| || ||||| || || ||| | ||| || |||||||||||
Sbjct 162 GGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGCCCGTCTTCCAGCTGCTTGCC 103
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || |||| |||||| ||||| || ||||| |||||||| |||||| |||
Sbjct 102 AGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTT 43
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGA 133623
| | ||||| ||||| ||||||| || || | ||||
Sbjct 42 CACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGAGTGA 2
>seq331414
Length=254
Score = 89.7 bits (98), Expect = 5e-13
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516
||| | ||||||||| ||||| || ||||| || || ||| | ||| || |||||
Sbjct 147 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCTTCCAGCTG 88
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
|||||| ||| | || |||| |||||| || ||||| |||||||| ||||| ||||||
Sbjct 87 CTTGCCAGCGAAGATCAGCCTCTGCTGATCAGGAGGAATGCCTTCTTTGTCCTGGATCTT 28
Query 133577 TTGCTTGAGCTGCTCAACCGTGTC 133600
||| | | ||||| |||||
Sbjct 27 GGCCTTCACATTCTCAATGGTGTC 4
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 477547249365520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |