Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyrurus_20tetrix_20tetrix_20[genbank_20GCA_5F000586395.1_202014-03- 08] 971,998 sequences; 657,025,294 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq430442 91.5 1e-13 >seq430442 Length=344 Score = 91.5 bits (100), Expect = 1e-13 Identities = 118/162 (73%), Gaps = 6/162 (4%) Strand=Plus/Plus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || |||| || || |||||||||||||| || || || ||||| || || ||||| Sbjct 86 CCTGTGACATGGGCTATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACT 145 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTT---TATTTTGTGAC 111894 ||||| ||||||||||| || || || || || || || || |||| |||| | Sbjct 146 CCTAGTCCCATATCTCCAGACCTCTGGTACAGTTGGCAAGACAGTTCGCCATTTAG---A 202 Query 111895 ACATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 || || || || ||||| |||| ||||| ||||| |||||| Sbjct 203 ACGTAGAACTGGCAAAGAGCATGGCAAGGTGGCAAGGCCATC 244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 387302523989674