Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyrurus_20tetrix_20tetrix_20[genbank_20GCA_5F000586395.1_202014-03- 08] 971,998 sequences; 657,025,294 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq291424 125 2e-23 >seq291424 Length=270 Score = 125 bits (138), Expect = 2e-23 Identities = 160/217 (74%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||||||||| ||||| ||||| || ||||||||||| || | | ||| | ||| ||| Sbjct 219 AGGACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGCCCGTCT 160 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| ||||||||||| || | | || || ||||| || Sbjct 159 TCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCCTCCTTGTCC 100 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAAGAGTAATAG 152070 || || || ||||||| |||| | | |||| || || | || |||| || || | Sbjct 99 TGGATCTTGGCTTTGACATTCTCGATGGTGTCACTGGGTTC-CACCTCCAAG-GTGATGG 42 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | ||||| || || ||||||||||||| |||||| || Sbjct 41 TCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATGTT 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1139451433778658