Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lyrurus_20tetrix_20tetrix_20[genbank_20GCA_5F000586395.1_202014-03-
08] 971,998 sequences; 657,025,294 total letters
Query= NC_033176.1
Length=224064
Score E
Sequences producing significant alignments: (Bits) Value
seq863563 152 7e-32
seq310436 134 2e-26
seq863562 91.5 2e-13
>seq863563
Length=2837
Score = 152 bits (168), Expect = 7e-32
Identities = 179/242 (74%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 9244 ATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGA 9303
||||||| || ||||| || || ||||| ||| ||| |||||||| || |||||||
Sbjct 350 ATGAGTCTTGTAGTCTGAAATAGCTGCTCATCATCCCACTCTGGATGCTCCTGTTTCAAG 291
Query 9304 ACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGT 9363
||||| || || ||||||||||| || ||||| || || || |||||||| || || ||
Sbjct 290 ACATCACAGACTCTGTTGTGTTCTCTTAGCCATATCGTTGCATACATCATTAGGCCTGGG 231
Query 9364 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGA 9423
|||| |||||| |||| || || |||| | ||| || || || || | |||||
Sbjct 230 ACCAAGCCAAACACCTCCTGCCCAACAGAAAACTGCAGGTGCTCAGGAACGTGAGGAGGG 171
Query 9424 TAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATC 9483
|||||||| | | || ||| || || | || ||||||||||| || |||||||||
Sbjct 170 TAGATCATCTCTGCTTGAGTGTCCTTTACTGTTGGTGGATACATTTCTCCATCAATCATC 111
Query 9484 TG 9485
||
Sbjct 110 TG 109
Score = 147 bits (162), Expect = 3e-30
Identities = 227/320 (71%), Gaps = 3/320 (1%)
Strand=Plus/Minus
Query 8289 GGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGC 8348
|||| || | || ||||| || || || ||| | |||| || ||| | | ||
Sbjct 2369 GGAAAGCAGTGAAAGGACAGCCTTTCACATTGTTGCAGATGAGCTTCTGTAAGGAGGCAG 2310
Query 8349 TCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGG 8408
| |||| || | |||||||| | ||| || |||||||| |||||||||||| | ||||
Sbjct 2309 TATTGATTATTTCAAACCCCACTTTTCCACCAAAGGTGCTTGGCTTCCAGTACTCAGGGG 2250
Query 8409 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGC 8468
|||| || || |||| || ||||| || |||||||| || || | || | ||
Sbjct 2249 AGCATATTGTATTTCCCATCAGTCCTTTCAGAGAGAACGGTGCGCCAATTTCTACCATTG 2190
Query 8469 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAAT-CCGGTGTACAGCTCC 8527
| ||||| |||||||| || | |||||||| || ||||| || | ||||| |||
Sbjct 2189 TTTCACCAAAGATGGCACCTGGTCTAGGCTTTTCTAC-AAGAAGGCCTGGATACAGTTCC 2131
Query 8528 ACAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT- 8586
| ||| || | |||||||||||| | ||||| ||||| || || |||||||||||
Sbjct 2130 ATAGCATCTATGTCTCCGTAAAGCTCTTCTAGTTCAGCAGCCATTTCTTTTTCTCCTGTA 2071
Query 8587 TTTATTAATAAAAAATAACA 8606
|||||||| || || ||||
Sbjct 2070 ATTATTAATGAATAAGAACA 2051
>seq310436
Length=623
Score = 134 bits (148), Expect = 2e-26
Identities = 215/309 (70%), Gaps = 0/309 (0%)
Strand=Plus/Minus
Query 8277 CATCGGGAACTCGGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACT 8336
|||| || || |||||||| | |||||||| ||| |||||| || || || ||
Sbjct 537 CATCCGGCACACGGAACGCCACGTACGGACACTTCTTCACGTTGAGGCACACGAGTTTCT 478
Query 8337 GAATAGTTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCC 8396
| | ||| ||||||||||| |||| || |||| || ||||| ||||||||||
Sbjct 477 CCAGTGATGCTGTCTTGACGATCTCGAAGCCGGTTGCTCCACCAAAGGTACTGGGCTTCC 418
Query 8397 AGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCA 8456
||||| | |||||||||||| ||| | | || || || || || || ||||| || |
Sbjct 417 AGTACTCTGGGGAGCAGATGGGATTCCCAAGAAGTCCCTTCAGTGAAAATGGAGCGCCAA 358
Query 8457 ACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGG 8516
||| | ||||| || || |||||| | ||||| |||| || || | || || || |
Sbjct 357 TCTCCACCATGCTTTCCCCAAAGATGCCATTGGGTTGGGGTTTCTCAAGCAGCAACCCTG 298
Query 8517 TGTACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCT 8576
|| | ||||| ||| || | |||||| || || || || || || || ||| ||
Sbjct 297 GATAAAACTCCAGAGCATCAATGTCTCCATACAGCTCCTCCAGCTCTGCTGCCTTCTTCT 238
Query 8577 TTTCTCCTG 8585
|||||||
Sbjct 237 CCTCTCCTG 229
>seq863562
Length=1711
Score = 91.5 bits (100), Expect = 2e-13
Identities = 110/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 9910 ACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCGTA 9969
|||||| || || | || |||||||| || || || || || || | |||| |||
Sbjct 164 ACCTTTAACACCCATCGGTGTTGGACAGTCATGTCCTACTGGTGGAAGGCTTCTTGTGTA 105
Query 9970 ATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATGGG 10029
|||||| |||||||| ||||||||||| | ||| | ||||| ||||||| | ||
Sbjct 104 ATAGGAAAGATTGGAATAAGCTTCCCAGGATTTGTAATTATAGTCACTGTTGTATGTTGG 45
Query 10030 AGGGCTGTCAATCAAATCGGATCTACCTGA 10059
|||||||||||||| | ||||| ||||
Sbjct 44 TGGGCTGTCAATCAAGTGTGATCTCGCTGA 15
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 708166764801920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |