Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq13614 93.3 9e-14 seq12564 93.3 9e-14 seq9553 93.3 9e-14 seq9014 93.3 9e-14 seq407 93.3 9e-14 seq15249 89.7 1e-12 seq12693 89.7 1e-12 seq12548 89.7 1e-12 seq11860 89.7 1e-12 seq11318 89.7 1e-12 seq8448 89.7 1e-12 seq7893 89.7 1e-12 seq7660 89.7 1e-12 seq5595 89.7 1e-12 seq4138 89.7 1e-12 seq809 87.8 4e-12 seq14719 84.2 5e-11 seq14123 84.2 5e-11 seq4885 84.2 5e-11 seq143 84.2 5e-11 >seq13614 Length=21227 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct 19409 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 19350 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 19349 GCCCCACGTTGGGC 19336 >seq12564 Length=18402 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct 916 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 857 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 856 GCCCCACGTTGGGC 843 >seq9553 Length=15391 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct 7796 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 7737 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 7736 GCCCCACGTTGGGC 7723 >seq9014 Length=6552 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct 1312 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 1253 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 1252 GCCCCACGTTGGGC 1239 >seq407 Length=14704 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct 6853 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 6912 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 6913 GCCCCACGTTGGGC 6926 >seq15249 Length=21085 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct 11891 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGAGTCGTGGGTTCGA 11950 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 11951 GCCCCACGTTGGGC 11964 >seq12693 Length=17994 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| |||||| |||||||||||||| Sbjct 12057 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCGTAATCTCAGGGTCGTGGGTTCGA 11998 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 11997 GCCCCACGTTGGGC 11984 >seq12548 Length=20319 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| |||||| |||||||||||||| Sbjct 2822 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCGTAATCTCAGGGTCGTGGGTTCGA 2763 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 2762 GCCCCACGTTGGGC 2749 >seq11860 Length=9218 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| |||||| |||||||||||||| Sbjct 8368 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCGTAATCTCAGGGTCGTGGGTTCGA 8309 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 8308 GCCCCACGTTGGGC 8295 >seq11318 Length=10512 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| |||||| |||||||||||||| Sbjct 6560 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCGTAATCTCAGGGTCGTGGGTTCGA 6501 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 6500 GCCCCACGTTGGGC 6487 >seq8448 Length=9103 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| |||||| |||||||||||||| Sbjct 3529 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCGTAATCTCAGGGTCGTGGGTTCGA 3470 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 3469 GCCCCACGTTGGGC 3456 >seq7893 Length=13371 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct 6179 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGAGTCGTGGGTTCGA 6120 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 6119 GCCCCACGTTGGGC 6106 >seq7660 Length=16686 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| |||||| |||||||||||||| Sbjct 10755 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCGTAATCTCAGGGTCGTGGGTTCGA 10696 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 10695 GCCCCACGTTGGGC 10682 >seq5595 Length=12710 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| |||||| |||||||||||||| Sbjct 10551 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCGTAATCTCAGGGTCGTGGGTTCGA 10492 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 10491 GCCCCACGTTGGGC 10478 >seq4138 Length=20441 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct 12793 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGAGTCGTGGGTTCGA 12852 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 12853 GCCCCACGTTGGGC 12866 >seq809 Length=42244815 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||| | Sbjct 17842300 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGTG 17842241 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 17842240 CCCCACGTTGGGC 17842228 >seq14719 Length=13524 Score = 84.2 bits (92), Expect = 5e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct 11305 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 11246 Query 165768 GCCCCACGATGGGC 165781 |||||| ||||| Sbjct 11245 CCCCCACATTGGGC 11232 >seq14123 Length=14769 Score = 84.2 bits (92), Expect = 5e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct 4342 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 4283 Query 165768 GCCCCACGATGGGC 165781 |||||| ||||| Sbjct 4282 CCCCCACATTGGGC 4269 >seq4885 Length=12682 Score = 84.2 bits (92), Expect = 5e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| |||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct 10719 TTGCCCGGCTAGCTCAGTCGGTAGAGTATGAGACTCTTAATCTCAGAGTCGTGGGTTCGA 10778 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 10779 GCCCCACGTTGGGC 10792 >seq143 Length=16292 Score = 84.2 bits (92), Expect = 5e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct 12374 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 12433 Query 165768 GCCCCACGATGGGC 165781 |||||| ||||| Sbjct 12434 CCCCCACATTGGGC 12447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057616430138450