Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 1e-13 >seq2 Length=61069995 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 18981 CCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTA 19040 |||||||| || | | || || || || ||| ||| || ||||| || |||||| | Sbjct 50380589 CCTCCATGCCATGCTCTTTGCCAATTCTATGTTCTAAATGGGGAATTGTCTTGCCAACTC 50380648 Query 19041 TACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTT 19100 || ||||| || || |||||||| || || || || ||||| ||||| | || |||| Sbjct 50380649 TATCAGAGGTCTGGAGATATGGGACTAGGAGTGCCTTTCAATATTGCCAGCTACTCACTG 50380708 Query 19101 CTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 || || ||||| | || ||||||||||| || || Sbjct 50380709 CTCACATACATGATTGCCCATGTTACAGGGCTAAA 50380743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399429431954175