Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 3e-11 >seq2 Length=61069995 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 145762 TGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCC 145821 ||||| | |||||| || ||||| ||||||||||| || ||||| ||||| || || ||| Sbjct 50380728 TGGGCAATCATGTATGTGAGCAGTGAGTAGCTGGCAATATTGAAAGGCACTCCTAGTCCC 50380669 Query 145822 ATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGG 145881 || || || || | ||| || || ||||| || | ||||| || ||||| ||| Sbjct 50380668 ATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCCCCATTTAGAACATAGAATTGG 50380609 Query 145882 CACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 || || ||||| || |||| ||||| Sbjct 50380608 CAAAGAGCATGGCATGGAGGCAAAGCCAT 50380580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589963837172600