Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq86 158 1e-33 >seq86 Length=18162390 Score = 158 bits (174), Expect = 1e-33 Identities = 191/258 (74%), Gaps = 4/258 (2%) Strand=Plus/Plus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 ||||||||||||||||||||| | |||||||||||| || || |||||| ||| ||| Sbjct 14670780 GAACTTCTCGAAGTTCCAGGCGATGTCGTTGCGGCAGACCGGGGACCAGATGATGTACTG 14670839 Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAA 83262 |||| | ||| |||| | ||||||| || ||||| |||||| ||||| Sbjct 14670840 CGGGTTGGTCATCAGCGAGGAGGGGTCGTCGTGCGGGAAGGGCAGCGCCTCTTTCAGGAA 14670899 Query 83263 GGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAG 83320 | ||||||||| || || |||| ||||| ||||||||||||||||| | || || Sbjct 14670900 CGTGAAGAGCGGGTGCGCGTCCTT--CCCGTTCACCTCGCACTTCTCGAACATGATGAAA 14670957 Query 83321 TTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTC 83380 || |||| ||| ||||| |||||||| ||||||| ||| |||| |||||| | || Sbjct 14670958 TTGGGCTTGAACCCGTTGCCAGGACGAACGTGCTCCAGCATGGGCAGGATCTCATCGTTG 14671017 Query 83381 TGGGCGTTTTCCTGGTGA 83398 | | ||||||||| || Sbjct 14671018 GTGCCATTTTCCTGGGGA 14671035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608680253462600