Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 4e-13 >seq2 Length=61069995 Score = 89.7 bits (98), Expect = 4e-13 Identities = 109/148 (74%), Gaps = 8/148 (5%) Strand=Plus/Minus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 |||||||||||||| |||||||| ||||| ||||| || ||||| | || || || ||| Sbjct 50377260 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATACACTGGTCCCAAATCCCCCTCCTCT 50377201 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGATCCATTTGCATCCCAAAT 97517 || | |||||| ||||||| |||| || || ||||| ||||||||||| Sbjct 50377200 CTGGTGCTGAAACCCTGCTTATC----CAGGAACTCACGTGACCCATTAGCATCCCAAAT 50377145 Query 97518 GTGCACACCAGATGCTGCAAGCTCTTTG 97545 | |||||| ||| | ||||||||| Sbjct 50377144 CTTCACACCTTTTGCAGAGAGCTCTTTG 50377117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346719272224550