Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq2 127 2e-24 >seq2 Length=61069995 Score = 127 bits (140), Expect = 2e-24 Identities = 130/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447 |||| | || | ||||||||||||||||| ||| || |||||||| || ||| || Sbjct 50380567 AGATATTTCTCTGATGGCTTTGCCTCCATGCCATGCTCTTTGCCAATTCTATGTTCTAAA 50380626 Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507 | |||||||| || ||| | ||||| | || | ||||||||||| || || ||||| Sbjct 50380627 TGGGGAATTGTCTTGCCAACTCTATCAGAGGTCTGGAGATATGGGACTAGGAGTGCCTTT 50380686 Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 ||||||||| || || | ||||| || || |||||||| |||||||||| Sbjct 50380687 CAATATTGCCAGCTACTCACTGCTCACATACATGATTGCCCATGTTACAG 50380736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399109491682675