Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq41 89.7 1e-12 >seq41 Length=584612 Score = 89.7 bits (98), Expect = 1e-12 Identities = 101/132 (77%), Gaps = 4/132 (3%) Strand=Plus/Plus Query 248892 TCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGC- 248950 |||||||||| ||||||| ||| | || || || |||||||| ||||| || || ||| Sbjct 560513 TCAGCACATGCTGATGCGGGTGTCCGTGGGCATCCACAAGGACGACATCGAC-GC-TGCC 560570 Query 248951 -TCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTC 249009 ||||||| |||| | || || |||||| | ||||| ||| | || ||||||||| Sbjct 560571 ATCGAGACCTACAACCTGCTGTCGGAGCGCTGGTTCACACACGCCTCCCCCACGCTCTTC 560630 Query 249010 AACGCCGGTACC 249021 |||||||| ||| Sbjct 560631 AACGCCGGCACC 560642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073555701865920