Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq14719 91.5 3e-13 seq14123 91.5 3e-13 seq13614 91.5 3e-13 seq12564 91.5 3e-13 seq9553 91.5 3e-13 seq9014 91.5 3e-13 seq407 91.5 3e-13 seq143 91.5 3e-13 seq15249 86.0 1e-11 seq12693 86.0 1e-11 seq12548 86.0 1e-11 seq11860 86.0 1e-11 seq11318 86.0 1e-11 seq8448 86.0 1e-11 seq7893 86.0 1e-11 seq7660 86.0 1e-11 seq5595 86.0 1e-11 seq4138 86.0 1e-11 seq809 86.0 1e-11 >seq14719 Length=13524 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 11306 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 11247 Query 142561 AGCCCCACATCGGGC 142575 | |||||||| |||| Sbjct 11246 ACCCCCACATTGGGC 11232 >seq14123 Length=14769 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 4343 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 4284 Query 142561 AGCCCCACATCGGGC 142575 | |||||||| |||| Sbjct 4283 ACCCCCACATTGGGC 4269 >seq13614 Length=21227 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 19410 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 19351 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 19350 AGCCCCACGTTGGGC 19336 >seq12564 Length=18402 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 917 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 858 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 857 AGCCCCACGTTGGGC 843 >seq9553 Length=15391 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 7797 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 7738 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 7737 AGCCCCACGTTGGGC 7723 >seq9014 Length=6552 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 1313 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 1254 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 1253 AGCCCCACGTTGGGC 1239 >seq407 Length=14704 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 6852 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 6911 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 6912 AGCCCCACGTTGGGC 6926 >seq143 Length=16292 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 12373 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 12432 Query 142561 AGCCCCACATCGGGC 142575 | |||||||| |||| Sbjct 12433 ACCCCCACATTGGGC 12447 >seq15249 Length=21085 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 11890 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGAGTCGTGGGTTCG 11949 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 11950 AGCCCCACGTTGGGC 11964 >seq12693 Length=17994 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| |||||| |||||| ||||||||||||| Sbjct 12058 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCGTAATCTCAGGGTCGTGGGTTCG 11999 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 11998 AGCCCCACGTTGGGC 11984 >seq12548 Length=20319 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| |||||| |||||| ||||||||||||| Sbjct 2823 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCGTAATCTCAGGGTCGTGGGTTCG 2764 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 2763 AGCCCCACGTTGGGC 2749 >seq11860 Length=9218 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| |||||| |||||| ||||||||||||| Sbjct 8369 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCGTAATCTCAGGGTCGTGGGTTCG 8310 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 8309 AGCCCCACGTTGGGC 8295 >seq11318 Length=10512 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| |||||| |||||| ||||||||||||| Sbjct 6561 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCGTAATCTCAGGGTCGTGGGTTCG 6502 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 6501 AGCCCCACGTTGGGC 6487 >seq8448 Length=9103 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| |||||| |||||| ||||||||||||| Sbjct 3530 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCGTAATCTCAGGGTCGTGGGTTCG 3471 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 3470 AGCCCCACGTTGGGC 3456 >seq7893 Length=13371 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 6180 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGAGTCGTGGGTTCG 6121 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 6120 AGCCCCACGTTGGGC 6106 >seq7660 Length=16686 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| |||||| |||||| ||||||||||||| Sbjct 10756 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCGTAATCTCAGGGTCGTGGGTTCG 10697 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 10696 AGCCCCACGTTGGGC 10682 >seq5595 Length=12710 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| |||||| |||||| ||||||||||||| Sbjct 10552 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCGTAATCTCAGGGTCGTGGGTTCG 10493 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 10492 AGCCCCACGTTGGGC 10478 >seq4138 Length=20441 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 12792 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGAGTCGTGGGTTCG 12851 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 12852 AGCCCCACGTTGGGC 12866 >seq809 Length=42244815 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| ||||||||||||| || Sbjct 17842299 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGTGC 17842240 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 17842239 CCCACGTTGGGC 17842228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027635114329915