Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq41 107 2e-18 >seq41 Length=584612 Score = 107 bits (118), Expect = 2e-18 Identities = 103/132 (78%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 95078 ACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCC 95137 ||||||||| ||| || || || ||||||||||||| |||||||| || ||||||| Sbjct 568783 ACGGTGTGAGGAACAGCCTCCTCCTGTCCCCCATGCCCACTGCCTCCACTGCCCAGATCC 568842 Query 95138 TTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCG 95197 | |||||||||||||| |||| |||| |||| |||| | |||| | | |||| ||| Sbjct 568843 TGGGCAACAACGAGTCCATCGAGCCCTACACCAGCAACATCTACACCCGCAGGGTCCTCT 568902 Query 95198 CCGGGGAATTCC 95209 | ||||| |||| Sbjct 568903 CGGGGGAGTTCC 568914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494628491427400