Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29]
15,315 sequences; 1,213,420,527 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq643 145 2e-29
seq617 131 4e-25
>seq643
Length=9611585
Score = 145 bits (160), Expect = 2e-29
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| |||||||| ||||| |||||||| |||| ||||||||||| | ||| | |||||
Sbjct 8385567 CAGCACAAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCATC 8385508
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | ||||||||| ||| ||| ||||| ||
Sbjct 8385507 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTC 8385448
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||||||| |||| |||||| | | || || || | ||||| ||
Sbjct 8385447 CTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCAACCTCGAGAGTGATGGT 8385388
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || || ||||| || ||
Sbjct 8385387 CTTGCCAGTCAGGGTCTTGACAAAGATCTG 8385358
Score = 140 bits (154), Expect = 8e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| ||||||||||| || || || || |||| ||||||||||| || || | |||||
Sbjct 8385795 CAGCACAAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGACCATC 8385736
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| ||||| ||||| || | ||||||||| || ||| ||||| ||
Sbjct 8385735 TTCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGTC 8385676
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||||||| |||| |||||| | | || || |||| ||||| ||
Sbjct 8385675 CTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCAACTTCCAGGGTGATGGT 8385616
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || ||||| || || ||
Sbjct 8385615 CTTGCCAGTCAGGGTCTTCACGAAGATCTG 8385586
Score = 127 bits (140), Expect = 5e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| ||||||||||| || || ||||| |||| ||||||||||| | || | |||||
Sbjct 8385111 CAGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATC 8385052
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || ||||| || || | |||||| || ||| ||| ||||| ||
Sbjct 8385051 TTCCAGCTGCTTGCCAGCGAAAATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTC 8384992
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| |||||| ||| | ||| || | | || || || | ||||| ||
Sbjct 8384991 CTGGATCTTGGCCTTCACATTTTCAATGGTATCACTGGGCTCAACCTCAAGGGTGATGGT 8384932
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || |||||||| || ||
Sbjct 8384931 CTTGCCAGTCAGGGTCTTCACAAAGATCTG 8384902
Score = 118 bits (130), Expect = 2e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| ||||||||||| || || || || |||| ||||||||||| | || | |||||
Sbjct 8385339 CAGCACAAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAGAGGGTACGACCATC 8385280
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||||||||| || ||||| || || | |||||| || ||| ||| ||||| ||
Sbjct 8385279 CTCCAGCTGCTTGCCAGCGAAAATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTC 8385220
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||||||| || | ||| || | | || || |||| ||||| ||
Sbjct 8385219 CTGGATCTTGGCCTTCACGTTCTCAATGGTATCACTGGGCTCAACTTCCAGGGTGATGGT 8385160
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || || ||||| || ||
Sbjct 8385159 CTTGCCAGTCAGGGTCTTGACAAAGATCTG 8385130
Score = 109 bits (120), Expect = 1e-18
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| || |||||||| || || ||||| |||| ||||||||| | || || | |||||
Sbjct 8386023 CAGCACGAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATC 8385964
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || || || || | ||||||||| || ||| || || ||
Sbjct 8385963 TTCCAGCTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 8385904
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| |||||| |||| || || | | || || |||| ||||| ||
Sbjct 8385903 CTGGATCTTGGCCTTCACATTCTCGATAGTATCACTGGGCTCAACTTCCAGGGTGATGGT 8385844
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || || ||||| || ||
Sbjct 8385843 CTTGCCAGTCAGGGTCTTGACAAAGATCTG 8385814
>seq617
Length=9440908
Score = 131 bits (144), Expect = 4e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||||||||| || || |||||||| |||| ||||||||||| || || | |||||
Sbjct 4533833 CAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGACCATC 4533892
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | ||||||||| ||| ||| || || ||
Sbjct 4533893 TTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCCTCCTTGTC 4533952
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||| || ||| | |||||| | | || || || | ||||| ||
Sbjct 4533953 CTGGATCTTGGCCTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGT 4534012
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || || ||||| || ||
Sbjct 4534013 CTTGCCAGTCAGGGTCTTGACAAAGATCTG 4534042
Score = 123 bits (136), Expect = 6e-23
Identities = 159/219 (73%), Gaps = 3/219 (1%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| || | ||| ||||| |||||||| |||| ||||||||||| || || | |||||
Sbjct 4534517 CAGCACTAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGACCATC 4534576
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || |||||||| || | |||||| || || ||| ||||| ||
Sbjct 4534577 TTCCAGCTGCTTCCCAGCGAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 4534636
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| |||||| ||| || || | |||||| | | || || || | ||||| ||
Sbjct 4534637 CTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGT 4534696
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
||| || || || ||||| || || || || ||||||
Sbjct 4534697 CTTTCCAGTCAGGGTTTTGACGAAGATCTG---CATTTT 4534732
Score = 122 bits (134), Expect = 2e-22
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||||||||| || || |||||||| |||| ||||||||| | ||| || | |||||
Sbjct 4534061 CAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTGCGACCATC 4534120
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | |||||| || || ||| ||||| ||
Sbjct 4534121 TTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 4534180
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| || || ||| | |||||| | | || || || | ||||| ||
Sbjct 4534181 CTGGATCTTGGCTTTGACATTTTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGT 4534240
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || || ||||| || ||
Sbjct 4534241 CTTGCCAGTCAGGGTCTTGACAAAGATCTG 4534270
Score = 104 bits (114), Expect = 6e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||||||||| || || || || || |||| ||| ||||| | || || | |||||
Sbjct 4534289 CAGGACAAGGTGCAGGGTAGATTCTTTCTGGATGTTATAGTCGGACAGGGTACGACCATC 4534348
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | ||| ||||| || ||| ||||| ||
Sbjct 4534349 TTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGTTGGTCGGGTGGAATGCCTTCCTTGTC 4534408
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| ||||| ||| || || | |||||| | | || || |||| ||||| ||
Sbjct 4534409 TTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATGGT 4534468
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || || ||||| || ||
Sbjct 4534469 CTTGCCAGTCAGGGTCTTGACAAATATCTG 4534498
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178690267951105
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