Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq715 107 2e-17 >seq715 Length=7679851 Score = 107 bits (118), Expect = 2e-17 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| ||||||| | ||||| ||||| ||||| || ||||| || || || ||||| Sbjct 4179394 GTTACTAATGCAGTGGTGACTGTCCCAGCCTATTTCAACGACTCCCAGCGCCAGGCTACG 4179453 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||||||| ||||| || || || || || | ||||||||||| || || || Sbjct 4179454 AAAGATGCTGGAACCATTGCAGGGCTCAACGTCCTGAGAATTATCAATGAGCCCACAGCA 4179513 Query 550511 GCTGCACTTGCATATGGACTTGATAAA 550537 ||||| |||| ||||| || || ||| Sbjct 4179514 GCTGCCATTGCCTATGGGCTGGACAAA 4179540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028486073729350