Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq759 237 2e-57 seq771 206 3e-48 >seq759 Length=6126289 Score = 237 bits (262), Expect = 2e-57 Identities = 650/990 (66%), Gaps = 7/990 (1%) Strand=Plus/Minus Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104 ||||||||| || || |||| ||||| || || || |||||| || ||| || | Sbjct 2091206 TGTGTCGCAAATACTCTTCCAAACATTTCACTGCAAAAGGGTCAACATCAGTGTCAAACT 2091147 Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164 |||| || || | ||||| ||| |||| ||||||| || |||||| ||| || | Sbjct 2091146 TATTAGCAAAGAAGTGGTG---GTTTCGTAGCATCCAGTTCAAGTCTCCTACCCCAAAAA 2091090 Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224 | ||||| || || ||||| || ||| |||| || |||||| | || ||||| | ||||| Sbjct 2091089 CACAGACAGAGCGAATGTGAACTCCGCTGCATGGTGGGTACGGTGCACCTTTGGACACGT 2091030 Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284 ||||||| ||||||||||||| ||||||||||| | || | |||||| || |||| Sbjct 2091029 CACCTTCAAAGTACTGCCACTTGACAAACCTGGCCAGTGCATTCATGTCAGAAACATCGT 2090970 Query 160285 ATTTGTACATCAG-GGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 | |||| || || | ||| ||||| || || | || || | ||| | || |||||| Sbjct 2090969 ACTTGT-CACTAGAAGAAACTGCACCTGGGACATCAGGGATTCTCTGAATTGTTGCCCAC 2090911 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG 160403 |||| || || |||||||| || || || | ||| || |||||||| ||| ||| Sbjct 2090910 AGGTACTCATCTGGGCTGTAAGTATCTTTTGCCCACTCAATGAACTCAAGTATTTTGCTG 2090851 Query 160404 TCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAAT 160463 | ||| | || | |||| | || | ||| || || || || || || Sbjct 2090850 CTTTCTAAAACATATTCTACAAATCTTCTGCTAACTATAAAATAGGCACTACCAGAAAAA 2090791 Query 160464 ATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTC 160523 || || | | ||| || | |||||| || ||||| | || | Sbjct 2090790 ATTGGAGTACTCAGAGGTGGTAGTTGTTTGTCTGTGCCTGTGTTCTTTATTTTACCATCA 2090731 Query 160524 ACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCT 160583 | | | | || | || |||||||| || || | ||||| ||| || || Sbjct 2090730 ATAATCTCATGGTGTTTTTTCCACCTTACTTCTTTATAAACAGGCATTTTTTCTGTTTCC 2090671 Query 160584 AGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGC 160643 | ||||| |||| | || | ||| | | || || || || |||| || || | Sbjct 2090670 AAGCTGTTTTCACCTTTAAGGGCTTTTAATTTCTCTACTATTTCCTGGTTGGTTTTTATA 2090611 Query 160644 GGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGG 160703 |||||||| |||| || | ||||| | ||| ||||| || | || || || Sbjct 2090610 GGAAAGTCCATACCACATAGATTTATTAGGTATTTCCAGTTTGAACTTCTACTGTAGAGA 2090551 Query 160704 TCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCT 160763 || ||||||| ||||| ||||||||||| | |||||| ||||| || || || ||||| Sbjct 2090550 TCTTTCATGCAGTTAATGTCTGCCTGCACCCTGCTCCATGAAGCATATACCACACTCTCT 2090491 Query 160764 AGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGC-CAGAAA 160822 | | || | | |||||| ||||| ||||| || || |||||| ||| || |||| Sbjct 2090490 AACTGGCTTGAAATAAAGACATTATCAAAACATGAGACTATTCCCTTCACAGCAGTGAAA 2090431 Query 160823 GAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGAT 160882 || || | | ||| ||| || || | ||| || | ||||| || || ||||| Sbjct 2090430 AAAGAT-TCTGGAGATTTTTTGTCTACATGAATGCAGTAAAAATTCTGTGGAGCATAGAT 2090372 Query 160883 GGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTAT 160942 | || || | || || | |||||| || || |||| | ||| || ||||| || || Sbjct 2090371 TGATCTTAGAAGTCTATCAAGCATCTCAATTTTGTGATAAACCACTATTGAGTAAGCAAT 2090312 Query 160943 CGGAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAA 161002 |||||| || | || || || || | | | | ||| || | |||||| | || Sbjct 2090311 CGGAAATTCTGCTTCTTCATTGCTGAGAGGTTCCATAATGTATTTCCTAGTCTTGGTGAA 2090252 Query 161003 ATAATCACAATCCCGCGTCATGTTGATATA 161032 | |||| || ||||||||| ||||| Sbjct 2090251 GGAGGCACAGTCTGCCGTCATGTTAATATA 2090222 >seq771 Length=4601986 Score = 206 bits (228), Expect = 3e-48 Identities = 620/943 (66%), Gaps = 38/943 (4%) Strand=Plus/Plus Query 160044 CTGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAAT 160103 ||||| ||||| || || || || || ||| |||| |||| || || |||||| Sbjct 3579947 CTGTGGCGCAGGTGCTCCTCGAGGCACAGGATGGCGGCATCGTCCACCTCGGGGTCGAAC 3580006 Query 160104 TTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAAC 160163 || || || || |||||||| | ||| || |||||| ||||||| || | |||| | Sbjct 3580007 TTGTTGGCCAAGAGATGGTGC---TGCTGCAGCATCCAGGGCACGTCGCCCGCCCCGTAG 3580063 Query 160164 ACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACG 160223 | ||||||||| || ||| |||| |||| ||||||||| | || || || | Sbjct 3580064 ATGCAGACGGAGCGCTGGTGGCGGCCGGTGCAGGGCGGGTACGGCGCGCCCTTGCTGGGG 3580123 Query 160224 TCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCG 160283 || || || ||||| |||||| || | | || | || | |||||| || | | Sbjct 3580124 TCGCCCTCCAGGTACTCCCACTTGACCAGGCGGGGAAGGGCGTTCATGTCCGACAGCTGG 3580183 Query 160284 TATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 | |||| | |||| ||||| || || ||||| ||||| || |||||||||||| Sbjct 3580184 AACTTGTCGTTGTGGGGCACGGCCCCCGGCACGCCCGGCATGCGGGTCAGGGTGGCCCAC 3580243 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG 160403 | ||| ||||| |||||||| |||||||| ||||| || | ||||| || | | | || Sbjct 3580244 ACGTGCTCGTCAGGGCTGTAGGTGTCCTTGGACCACTCGAGGAACT-TCTG--TGCCGTG 3580300 Query 160404 ----TCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGA 160459 || || || | ||| ||| || | ||||| || | ||||||| |||| | Sbjct 3580301 GGGTTCTCGAAG-AGGTGCCGCACGAAGCCCCGTGTCACCACGATGTACGCGTTGCCCGT 3580359 Query 160460 GAATATCGG------TATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACAC 160513 ||| || || | ||| ||| || | ||| ||| | | |||| || Sbjct 3580360 GAACATGGGGCAGTTGAGGGGCGGCGGCAGCTTCTCTATGT-CGGTCCGG-----GA--- 3580410 Query 160514 CACTCCTTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCG 160573 | | ||| ||| | |||| | || ||| | || |||| || | | || Sbjct 3580411 GATGGCCTTCCCCACCTCGTGGTGGAACTGCCAGCGCGCCCGCTTG-GCCGCCGAGGGCT 3580469 Query 160574 T-TCCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCA--GCTGCTTGACGATCTCTAG 160630 | |||| ||| || ||||| || | ||| |||| || || |||||||| Sbjct 3580470 TCTCCGACTCCAGGCTGTTCCGGCCCTGCAGCACCTTCAGGGCGGC-GCACGATCTCGGC 3580528 Query 160631 GTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTC---GC 160687 ||| ||||||| || |||||||| ||||| ||| | || |||| ||| | | Sbjct 3580529 GTTGGTCTTGATGGGGAAGTCGGTGCCGCAGGTGTTGAGCAGGTACCGCCAGGGCACGGG 3580588 Query 160688 GCTCAGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGC 160747 |||| | ||||||||| |||||| || | || ||||||| ||| |||||| || Sbjct 3580589 GCTCCG---CAGCAGGTCCCGCATGCAGTTGAGGTCGGCCTGCAGCCGGGACCAGGAGGC 3580645 Query 160748 GTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCC 160807 ||| || ||||| || || |||||||| |||||||| ||| || |||| | Sbjct 3580646 GTAGACCACGTTTTCCAGGCGGCTGGCCACGAAGACGTTGGGGAAGCAGCCTGCGATGGC 3580705 Query 160808 CACCACCGCCAGAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTT 160867 | ||| ||| ||| | ||| | ||||||||||||||| || | ||| Sbjct 3580706 CCGCACGGCCTCCTGGAAGGCGGCCGGGGACTTGCTGTCCACGTGCACGCAGTAGACGTT 3580765 Query 160868 CTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCG-AACATCTCTATCTTATGATGGATCA 160926 ||| || ||||||| || | || | || |||| |||||||| || || | ||||| | Sbjct 3580766 CTGGGGGGCGTAGAGGGAGCGCAGGAGCCGCTCGAAACATCTCGATTTTGTTGTGGATGA 3580825 Query 160927 CGATAGAGTAGGCTATCGGAAACTCGGTCTCCTCGCGACTCAG 160969 | || |||||||| || || ||||| | |||||| | ||||| Sbjct 3580826 CCATGGAGTAGGCGATGGGGAACTCCGCCTCCTCCTGGCTCAG 3580868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577108698599400