Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29]
15,315 sequences; 1,213,420,527 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq643 136 4e-27
seq617 134 1e-26
>seq643
Length=9611585
Score = 136 bits (150), Expect = 4e-27
Identities = 151/199 (76%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
|||||| |||||||| || ||||| || | || ||| | ||||| ||||||||||
Sbjct 8385324 GGTGGATTCTTTCTGGATGTTGTAGTCAGAGAGGGTACGACCA-TCCTCCAGCTGCTTGC 8385266
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| |||| |||| |||||| |||||||| |||||||||||||| |||||| ||
Sbjct 8385265 CAGCGAAAATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 8385206
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||||| || || ||||||| || || | ||||| ||| ||||| ||||| |
Sbjct 8385205 TCACGTTCTCAATGGTATCACTGGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGG 8385146
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || || ||||||||
Sbjct 8385145 TCTTGACAAAGATCTGCAT 8385127
Score = 129 bits (142), Expect = 6e-25
Identities = 150/200 (75%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
|||||| || ||||| || ||||| || | ||| ||| | || || ||||||||||
Sbjct 8385096 GGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCA-TCTTCCAGCTGCTTGC 8385038
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| |||| |||| |||||| |||||||| |||||||||||||| |||||| ||
Sbjct 8385037 CAGCGAAAATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 8384978
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | |||| || || ||||||| || || | ||||| ||| ||||| ||||| |
Sbjct 8384977 TCACATTTTCAATGGTATCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGG 8384918
Query 133642 TTTTTACGAAAATCTGCATG 133661
| || || || |||||||||
Sbjct 8384917 TCTTCACAAAGATCTGCATG 8384898
Score = 122 bits (134), Expect = 8e-23
Identities = 148/199 (74%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
|||||| || ||||| || ||||| ||| || ||| ||| | || || ||||||||||
Sbjct 8386008 GGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCA-TCTTCCAGCTGCTTGC 8385950
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || |||| |||| ||||||||| || || ||||| |||||||| |||||| ||
Sbjct 8385949 CAGCAAAAATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCT 8385890
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||| | || || ||||||| || || | ||||| ||| ||||| ||||| |
Sbjct 8385889 TCACATTCTCGATAGTATCACTGGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGG 8385830
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || || ||||||||
Sbjct 8385829 TCTTGACAAAGATCTGCAT 8385811
Score = 120 bits (132), Expect = 3e-22
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| || | ||| ||| | || || |||||||||||
Sbjct 8385551 GTTGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCA-TCTTCCAGCTGCTTGCC 8385493
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || |||| ||||||||| ||||| |||||||||||||| |||||| |||
Sbjct 8385492 AGCAAAGATCAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTT 8385433
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | ||| | ||||| ||||||| || |||| |||| ||| ||||| ||||| ||
Sbjct 8385432 CACGTTCTCGATGGTGTCACTGGGCTCAACCTCGAGAGTGATGGTCTTGCCAGTCAGGGT 8385373
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || || ||||||||
Sbjct 8385372 CTTGACAAAGATCTGCAT 8385355
Score = 118 bits (130), Expect = 1e-21
Identities = 147/199 (74%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
|||||| |||||||| || ||||| || || || ||| | || || |||||||| |
Sbjct 8385780 GGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGACCA-TCTTCCAGCTGCTTCC 8385722
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || |||| ||||||||| || || || ||||||||||| |||||| ||
Sbjct 8385721 CGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTGGATCTTGGCCT 8385662
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||| | ||||| ||||||| || || | ||||| ||| ||||| ||||| |
Sbjct 8385661 TCACGTTCTCGATGGTGTCACTGGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGG 8385602
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 8385601 TCTTCACGAAGATCTGCAT 8385583
>seq617
Length=9440908
Score = 134 bits (148), Expect = 1e-26
Identities = 150/198 (76%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| || || || ||| | || || |||||||| ||
Sbjct 4534533 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGACCA-TCTTCCAGCTGCTTCCC 4534591
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || |||| |||||| || || || |||||||||||||| ||||||| |||
Sbjct 4534592 AGCGAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTT 4534651
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||||| ||||| ||||||| || || | ||||| ||| || || ||||| ||
Sbjct 4534652 GACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTTCCAGTCAGGGT 4534711
Query 133643 TTTTACGAAAATCTGCAT 133660
||| ||||| ||||||||
Sbjct 4534712 TTTGACGAAGATCTGCAT 4534729
Score = 127 bits (140), Expect = 2e-24
Identities = 149/199 (75%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| || || || ||| | || || |||||||| |
Sbjct 4533848 GGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGACCA-TCTTCCAGCTGCTTCC 4533906
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || |||| ||||||||||||||| ||||| |||||||| |||||| ||
Sbjct 4533907 CAGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCT 4533966
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | |||| ||||| ||||||| || || | ||||| ||| ||||| ||||| |
Sbjct 4533967 TGACATTTTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGG 4534026
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || || ||||||||
Sbjct 4534027 TCTTGACAAAGATCTGCAT 4534045
Score = 122 bits (134), Expect = 8e-23
Identities = 148/199 (74%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| ||| || ||| ||| | || || |||||||| |
Sbjct 4534076 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTGCGACCA-TCTTCCAGCTGCTTCC 4534134
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || |||| |||||| || || || |||||||||||||| |||||| |
Sbjct 4534135 CAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCTT 4534194
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | |||| ||||| ||||||| || || | ||||| ||| ||||| ||||| |
Sbjct 4534195 TGACATTTTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGG 4534254
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || || ||||||||
Sbjct 4534255 TCTTGACAAAGATCTGCAT 4534273
Score = 122 bits (134), Expect = 8e-23
Identities = 148/199 (74%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| || |||||||| || || || ||| || || ||| | || || |||||||| |
Sbjct 4534304 GGTAGATTCTTTCTGGATGTTATAGTCGGACAGGGTACGACCA-TCTTCCAGCTGCTTCC 4534362
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || |||| ||| |||||||| || |||||||||||||| |||||| ||
Sbjct 4534363 CAGCAAAGATCAGCCTCTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGGATCTTGGCCT 4534422
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | ||||| ||||| ||||||| || || | ||||| ||| ||||| ||||| |
Sbjct 4534423 TGACATTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGG 4534482
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || || ||||||||
Sbjct 4534483 TCTTGACAAATATCTGCAT 4534501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483328255130600
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