Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2 100 3e-16 >seq2 Length=61069995 Score = 100 bits (110), Expect = 3e-16 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || || || || ||||| | |||||| |||||||| ||||||||||| || ||||| Sbjct 50380744 CTTTAGCCCTGTAACATGGGCAATCATGTATGTGAGCAGTGAGTAGCTGGCAATATTGAA 50380685 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || || || ||||| || || |||||||| || || ||||| || | ||||| | Sbjct 50380684 AGGCACTCCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCCCCATT 50380625 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 || || || ||||| || ||||| || |||| ||||| Sbjct 50380624 TAGAACATAGAATTGGCAAAGAGCATGGCATGGAGGCAAAGCCAT 50380580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583376298516000