Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq643 82.4 6e-11 >seq643 Length=9611585 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || ||||| || || |||||||||||||||| ||| ||||| || ||| | Sbjct 8385811 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTGGAAGTTGAGCCCAGT 8385870 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || | | | ||||| || || ||||| || ||| | ||| || || Sbjct 8385871 GATACTATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAG 8385930 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || ||||| |||| ||| ||||| || | |||||| | || || ||| |||||| Sbjct 8385931 CAGAGGCTGATTTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCCGACTACAAC 8385990 Query 106440 ATACAAAAAGAATCTACACTACA 106462 || || || ||||| || || || Sbjct 8385991 ATCCAGAAGGAATCCACCCTCCA 8386013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402254504551520