Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq835 98.7 1e-15 >seq835 Length=3194076 Score = 98.7 bits (108), Expect = 1e-15 Identities = 195/289 (67%), Gaps = 0/289 (0%) Strand=Plus/Minus Query 214605 AAGGAGATAGCTGTCGAGCTGGAGGCCTTCTACGGTGATATCGAAGCCGTCGAACTCTAC 214664 ||||| || || | |||||||||| | || || || || || ||| | || || ||| Sbjct 1703107 AAGGAAATGGCAGCTGAGCTGGAGGAGCTGTATGGAGACATTGATGCCATGGAGCTGTAC 1703048 Query 214665 GCTGATTTCCTCGCTGAAAAACCGTGTCCCGATGCCATCCTCGGTGACGGCGTCCTCGAG 214724 | | | || | ||||| || | || | ||||||| |||| || | | | ||| Sbjct 1703047 CCAGGCCTTCTGGTGGAAAAGCCACGCCCAGGTGCCATCTTCGGAGAAACCATGGTGGAG 1702988 Query 214725 TCGGGGGCTCCGTTCTCCCTGAGGGGACTCGCGGCGAACGTCATCTGCTCCCCGGGCTAC 214784 ||| || ||||||||||||| |||||| || || | |||||||||||| | ||| Sbjct 1702987 ATGGGAGCCCCGTTCTCCCTGAAGGGACTGATGGGCAATGCCATCTGCTCCCCCGAGTAC 1702928 Query 214785 TGGAAACGCAACACACTCGGTAGCTCCGCGAGTTTCAACATCGTGAGGAGCGCGACCCTT 214844 ||||| | || ||| ||||| || | | | || ||||| | | | || || | Sbjct 1702927 TGGAAGCCCAGCACCTTCGGTGGCAAAGTGGGCTTTGACATCATCAACACTGCCTCCTTG 1702868 Query 214845 CAGTCTCTCATCTGTAGCAACGTCAAGGGATGTCCGTTAGCCGCATTCC 214893 || |||||||| | ||| |||||||| ||||| || | || |||| Sbjct 1702867 CAAAAGCTCATCTGCAACAATGTCAAGGGCTGTCCCTTCACTGCCTTCC 1702819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723202325445600