Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq643 86.0 5e-12 >seq643 Length=9611585 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || |||||||| | | |||| | ||||| ||||| || || Sbjct 8385095 GTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCA 8385036 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| |||| || | ||| ||||| || || | || || || || ||||||| ||| Sbjct 8385035 GCGAAAATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 8384976 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | |||| | || || ||| ||||| || || || || | ||||| ||||| || Sbjct 8384975 ACATTTTCAATGGTATCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTC 8384916 Query 27231 TTCACAAAGATTTGCAT 27247 ||||||||||| ||||| Sbjct 8384915 TTCACAAAGATCTGCAT 8384899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424855085330280