Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq2 105 5e-18 >seq2 Length=61069995 Score = 105 bits (116), Expect = 5e-18 Identities = 116/153 (76%), Gaps = 6/153 (4%) Strand=Plus/Minus Query 111787 TGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCC 111846 || ||||||||||||||||| || ||| || ||||| || || ||||| ||||| ||| Sbjct 50380728 TGGGCAATCATGTATGTGAGCAGTGAGTAGCTGGCAATATTGAAAGGCACTCCTAGTCCC 50380669 Query 111847 ATATCTCCCGATCTTTGATATAGCTGACATGATAGTT---TATTTTGTGACACATAAAAT 111903 |||||||| || || ||||| || || || || | || |||| | ||||| ||| Sbjct 50380668 ATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCCCCATTTAG---AACATAGAAT 50380612 Query 111904 TGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 || ||||| |||| || |||||||| |||||| Sbjct 50380611 TGGCAAAGAGCATGGCATGGAGGCAAAGCCATC 50380579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391872442741345