Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq617 122 8e-23 >seq617 Length=9440908 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || || ||||| |||||| | || || || ||||| || || Sbjct 4534501 ATGCAGATATTTGTCAAGACCCTGACTGGCAAGACCATCACCCTGGAAGTTGAGCCCAGT 4534442 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| ||||| || || |||||||| |||||||| |||||||| ||| Sbjct 4534441 GACACCATTGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCACCCGACCAA 4534382 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || || ||||||| || ||| | ||||| || ||| Sbjct 4534381 CAGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGTCGTACCCTGTCCGACTATAAC 4534322 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || || ||| | || | || ||||| || | ||||| || Sbjct 4534321 ATCCAGAAAGAATCTACCCTGCACCTTGTCCTGCGTCTGAGAGGTGGGAT 4534272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434835140308800